]> git.donarmstrong.com Git - mothur.git/commit
Initial revision
authorwestcott <westcott>
Fri, 16 Jan 2009 22:17:34 +0000 (22:17 +0000)
committerwestcott <westcott>
Fri, 16 Jan 2009 22:17:34 +0000 (22:17 +0000)
commit20a2d0350a737a434c89f303662d64a8eeea7b05
tree0627297e381cfcbf23df69d57518589ffc8d59d4
parentbbb5879a7e566935c23d63d42bb945072424b939
Initial revision
154 files changed:
Mothur.1 [new file with mode: 0644]
Mothur.xcodeproj/project.pbxproj [new file with mode: 0644]
ace.cpp [new file with mode: 0644]
ace.h [new file with mode: 0644]
averagelinkage.cpp [new file with mode: 0644]
bootstrap.cpp [new file with mode: 0644]
bootstrap.h [new file with mode: 0644]
calculator.cpp [new file with mode: 0644]
calculator.h [new file with mode: 0644]
chao1.cpp [new file with mode: 0644]
chao1.h [new file with mode: 0644]
cluster.cpp [new file with mode: 0644]
cluster.hpp [new file with mode: 0644]
clustercommand.cpp [new file with mode: 0644]
clustercommand.h [new file with mode: 0644]
collect.cpp [new file with mode: 0644]
collect.h [new file with mode: 0644]
collectcommand.cpp [new file with mode: 0644]
collectcommand.h [new file with mode: 0644]
collectdisplay.h [new file with mode: 0644]
collectorscurvedata.h [new file with mode: 0644]
collectsharedcommand.cpp [new file with mode: 0644]
collectsharedcommand.h [new file with mode: 0644]
command.hpp [new file with mode: 0644]
commandfactory.cpp [new file with mode: 0644]
commandfactory.hpp [new file with mode: 0644]
commandoptionparser.cpp [new file with mode: 0644]
commandoptionparser.hpp [new file with mode: 0644]
completelinkage.cpp [new file with mode: 0644]
database.cpp [new file with mode: 0644]
database.hpp [new file with mode: 0644]
datavector.hpp [new file with mode: 0644]
display.h [new file with mode: 0644]
engine.cpp [new file with mode: 0644]
engine.hpp [new file with mode: 0644]
errorchecking.cpp [new file with mode: 0644]
errorchecking.h [new file with mode: 0644]
fastamap.cpp [new file with mode: 0644]
fastamap.h [new file with mode: 0644]
fileoutput.cpp [new file with mode: 0644]
fileoutput.h [new file with mode: 0644]
globaldata.cpp [new file with mode: 0644]
globaldata.hpp [new file with mode: 0644]
groupmap.cpp [new file with mode: 0644]
groupmap.h [new file with mode: 0644]
helpcommand.cpp [new file with mode: 0644]
helpcommand.h [new file with mode: 0644]
inputdata.cpp [new file with mode: 0644]
inputdata.h [new file with mode: 0644]
jackknife.cpp [new file with mode: 0644]
jackknife.h [new file with mode: 0644]
kmer.cpp [new file with mode: 0644]
kmer.hpp [new file with mode: 0644]
kmerdb.cpp [new file with mode: 0644]
kmerdb.hpp [new file with mode: 0644]
listvector.cpp [new file with mode: 0644]
listvector.hpp [new file with mode: 0644]
mothur.cpp [new file with mode: 0644]
nameassignment.cpp [new file with mode: 0644]
nameassignment.hpp [new file with mode: 0644]
nocommand.cpp [new file with mode: 0644]
nocommand.h [new file with mode: 0644]
npshannon.cpp [new file with mode: 0644]
npshannon.h [new file with mode: 0644]
observable.h [new file with mode: 0644]
ordervector.cpp [new file with mode: 0644]
ordervector.hpp [new file with mode: 0644]
parselistcommand.cpp [new file with mode: 0644]
parselistcommand.h [new file with mode: 0644]
progress.cpp [new file with mode: 0644]
progress.hpp [new file with mode: 0644]
quitcommand.cpp [new file with mode: 0644]
quitcommand.h [new file with mode: 0644]
rabundvector.cpp [new file with mode: 0644]
rabundvector.hpp [new file with mode: 0644]
rarecalc.cpp [new file with mode: 0644]
rarecalc.h [new file with mode: 0644]
raredisplay.cpp [new file with mode: 0644]
raredisplay.h [new file with mode: 0644]
rarefact.cpp [new file with mode: 0644]
rarefact.h [new file with mode: 0644]
rarefactcommand.cpp [new file with mode: 0644]
rarefactcommand.h [new file with mode: 0644]
rarefactioncurvedata.h [new file with mode: 0644]
rarefactsharedcommand.cpp [new file with mode: 0644]
rarefactsharedcommand.h [new file with mode: 0644]
readdistcolumnfilecommand.h [new file with mode: 0644]
readdistphylipfilecommand.cpp [new file with mode: 0644]
readdistphylipfilecommand.h [new file with mode: 0644]
readlistfilecommand.h [new file with mode: 0644]
readmatrix.cpp [new file with mode: 0644]
readmatrix.hpp [new file with mode: 0644]
readrabundfilecommand.cpp [new file with mode: 0644]
readsabundfilecommand.cpp [new file with mode: 0644]
readsabundfilecommand.h [new file with mode: 0644]
sabundvector.cpp [new file with mode: 0644]
sabundvector.hpp [new file with mode: 0644]
sequence.cpp [new file with mode: 0644]
sequence.hpp [new file with mode: 0644]
shannon.cpp [new file with mode: 0644]
shannon.h [new file with mode: 0644]
shared.cpp [new file with mode: 0644]
shared.h [new file with mode: 0644]
sharedace.cpp [new file with mode: 0644]
sharedace.h [new file with mode: 0644]
sharedchao1.cpp [new file with mode: 0644]
sharedchao1.h [new file with mode: 0644]
sharedcommand.cpp [new file with mode: 0644]
sharedcommand.h [new file with mode: 0644]
sharedjabund.cpp [new file with mode: 0644]
sharedjabund.h [new file with mode: 0644]
sharedjclass.cpp [new file with mode: 0644]
sharedjclass.h [new file with mode: 0644]
sharedjest.cpp [new file with mode: 0644]
sharedjest.h [new file with mode: 0644]
sharedordervector.cpp [new file with mode: 0644]
sharedordervector.h [new file with mode: 0644]
sharedrabundvector.cpp [new file with mode: 0644]
sharedrabundvector.h [new file with mode: 0644]
sharedsabundvector.cpp [new file with mode: 0644]
sharedsabundvector.h [new file with mode: 0644]
sharedsobs.cpp [new file with mode: 0644]
sharedsobs.h [new file with mode: 0644]
sharedsorabund.cpp [new file with mode: 0644]
sharedsorabund.h [new file with mode: 0644]
sharedsorclass.cpp [new file with mode: 0644]
sharedsorclass.h [new file with mode: 0644]
sharedsorest.cpp [new file with mode: 0644]
sharedsorest.h [new file with mode: 0644]
sharedthetan.cpp [new file with mode: 0644]
sharedthetan.h [new file with mode: 0644]
sharedthetayc.cpp [new file with mode: 0644]
sharedthetayc.h [new file with mode: 0644]
simpson.cpp [new file with mode: 0644]
simpson.h [new file with mode: 0644]
singlelinkage.cpp [new file with mode: 0644]
sobs.h [new file with mode: 0644]
sparsematrix.cpp [new file with mode: 0644]
sparsematrix.hpp [new file with mode: 0644]
summarycommand.cpp [new file with mode: 0644]
summarycommand.h [new file with mode: 0644]
summarydata.h [new file with mode: 0644]
summarydisplay.h [new file with mode: 0644]
summarysharedcommand.cpp [new file with mode: 0644]
summarysharedcommand.h [new file with mode: 0644]
utilities.hpp [new file with mode: 0644]
uvest.cpp [new file with mode: 0644]
uvest.h [new file with mode: 0644]
validcalculator.cpp [new file with mode: 0644]
validcalculator.h [new file with mode: 0644]
validcommands.cpp [new file with mode: 0644]
validcommands.h [new file with mode: 0644]
validparameter.cpp [new file with mode: 0644]
validparameter.h [new file with mode: 0644]