]> git.donarmstrong.com Git - mothur.git/commit
fixed bug with shhh.flow from file path name in write functions, added "smart" featur...
authorwestcott <westcott>
Thu, 19 Jan 2012 12:44:14 +0000 (12:44 +0000)
committerwestcott <westcott>
Thu, 19 Jan 2012 12:44:14 +0000 (12:44 +0000)
commit16abd6271c455bd01b34ff89a2e3641bef0fa128
treef24ddf1af909804f1e7efa373bce2a0963c1366f
parent896a4f281982a3c2889f6ce6d73be997072aceae
fixed bug with shhh.flow from file path name in write functions, added "smart" feature with namefile, added fasta and qfile parameters to fastq.info, added checking for reverse sequences in classifier.
60 files changed:
Mothur.xcodeproj/project.pbxproj
bayesian.cpp
bayesian.h
binsequencecommand.cpp
classify.cpp
classify.h
classifyotucommand.cpp
classifyseqscommand.cpp
classifyseqscommand.h
clusterfragmentscommand.cpp
clustersplitcommand.cpp
consensusseqscommand.cpp
database.hpp
deconvolutecommand.cpp
getgroupscommand.cpp
getlineagecommand.cpp
getseqscommand.cpp
groupmap.h
kmer.cpp
kmer.hpp
kmerdb.cpp
kmerdb.hpp
knn.cpp
makefile
memchi2.cpp
mergegroupscommand.cpp
mergegroupscommand.h
mothur.h
mothurout.cpp
optionparser.cpp
optionparser.h
parsefastaqcommand.cpp
parsefastaqcommand.h
parsimonycommand.cpp
phylodiversitycommand.cpp
phylosummary.cpp
phylotree.cpp
phylotypecommand.cpp
preclustercommand.cpp
referencedb.cpp
referencedb.h
removegroupscommand.cpp
removelineagecommand.cpp
removeseqscommand.cpp
screenseqscommand.cpp
secondarystructurecommand.cpp
seqerrorcommand.cpp
seqsummarycommand.cpp
sequence.cpp
setdircommand.cpp
shhhercommand.cpp
shhhseqscommand.cpp
splitabundcommand.cpp
splitgroupscommand.cpp
subsamplecommand.cpp
summaryqualcommand.cpp
summarytaxcommand.cpp
trimseqscommand.cpp
unifracunweightedcommand.cpp
unifracweightedcommand.cpp