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fixes while testing 1.33.0
[mothur.git] / Mothur.xcodeproj /
2012-03-28 Sarah Westcottminor changes to pcr.seqs. Added filterToPos and filte... tree | commitdiff
2012-03-27 Sarah Westcottadded pcr.seqs command. fixed bug in rarefacftion.singl... tree | commitdiff
2012-03-13 Sarah Westcottadded unix to ifdefs. minor changes while testing 1... tree | commitdiff
2012-03-02 Sarah Westcottadded cooccurence command tree | commitdiff
2012-02-20 Sarah Westcottremoved unused copy constructors and comments within... tree | commitdiff
2012-02-06 Sarah WestcottMerge remote-tracking branch 'mothur/master' tree | commitdiff
2012-02-06 Sarah Westcottadded sort.seqs command. puts sequences from a fasta... tree | commitdiff
2012-02-03 Pat Schlossupped the optimization code for debugging from -O0... tree | commitdiff
2012-01-30 Sarah Westcotttest ignore tree | commitdiff
2012-01-30 Sarah Westcotttest tree | commitdiff
2012-01-30 Sarah Westcotttest tree | commitdiff
2012-01-30 Sarah Westcotttest tree | commitdiff
2012-01-30 Sarah Westcottadded test comment tree | commitdiff
2012-01-25 westcottadded otu.association command. added calcSpearman,... tree | commitdiff
2012-01-19 westcottfixed bug with shhh.flow from file path name in write... tree | commitdiff
2012-01-09 westcott1.23.0 tree | commitdiff
2011-12-23 westcottadded qvalues to metastats. fixed bug with chimera... tree | commitdiff
2011-11-29 westcottAdded summary.qual command. Added fontsize parameter... tree | commitdiff
2011-11-11 westcottfixed bug with trim.flows that was adding flow files... tree | commitdiff
2011-11-07 westcottworking on chimera.perseus. made removeConfidences... tree | commitdiff
2011-10-18 westcott1.22.0 tree | commitdiff
2011-10-11 pschlosscamberra fix tree | commitdiff
2011-09-23 westcottadded summary.tax command and fixed bug with root level... tree | commitdiff
2011-09-13 westcottworking on windows paralellization, added trimOligos... tree | commitdiff
2011-08-22 westcottadded multiple processors option for Windows users... tree | commitdiff
2011-08-09 westcottadded count.groups command and paralellized align.seqs... tree | commitdiff
2011-07-20 westcott1.21.0 tree | commitdiff
2011-07-15 westcottrewrote metastats command in c++, added mothurRemove... tree | commitdiff
2011-07-06 westcottadded save parameter to align.seqs, chimera commands... tree | commitdiff
2011-06-28 westcottindicator command tree | commitdiff
2011-06-17 westcott1.20.0 tree | commitdiff
2011-06-01 westcottadded count.seqs command and made some modifcations... tree | commitdiff
2011-05-27 westcottadded deunique.tree command tree | commitdiff
2011-05-16 westcottadded chimera.uchime tree | commitdiff
2011-05-11 westcottworking on citations tree | commitdiff
2011-05-09 westcott1.19.0 tree | commitdiff
2011-05-06 westcottfixed template=self thing tree | commitdiff
2011-05-04 westcottchimera.slayer tree | commitdiff
2011-04-25 westcottfixed ties issue in maligner getBlastSeqs tree | commitdiff
2011-04-20 pschlosssome alterations to chimera.slayer tree | commitdiff
2011-04-18 westcottmodified chimera.slayer template=self tree | commitdiff
2011-04-15 westcott1.18.1 tree | commitdiff
2011-04-11 westcott1.18.0 - fixed make.shared abort issue tree | commitdiff
2011-04-08 westcottfixing bugs while testing tree | commitdiff
2011-04-07 westcottfixed bug with tree reading tree | commitdiff
2011-04-06 westcottadded getCommandInfoCommand for gui tree | commitdiff
2011-04-06 westcottremoved read.dist, read.otu, read.tree and globaldata... tree | commitdiff
2011-03-16 westcottadded set.current and get.current commands and modified... tree | commitdiff
2011-03-15 westcottadding current file class tree | commitdiff
2011-03-11 westcottadded namefile to summary.seqs tree | commitdiff
2011-03-07 pschlossfix trim.seqs / qualscores bug tree | commitdiff
2011-03-04 westcottbug fixes tree | commitdiff
2011-03-03 pschlossmodified seqerror and qualscores tree | commitdiff
2011-02-28 westcottfixed unweighted command tree | commitdiff
2011-02-26 pschlosssome minor changes tree | commitdiff
2011-02-25 westcottchanged version and release date tree | commitdiff
2011-02-23 westcottfixed bug in unifrac commands with unrooted trees tree | commitdiff
2011-02-21 pschlossreworked amova / homova / anosim tree | commitdiff
2011-02-18 westcottfixed unifrac bug with multiple processors if numComps... tree | commitdiff
2011-02-15 pschlossfixed an mpi bug in shhh.seqs tree | commitdiff
2011-02-15 westcottworking on anosim command tree | commitdiff
2011-02-15 pschlossfixed bugg in shhh.seqs command tree | commitdiff
2011-02-15 westcottfixed mpi version compile issue with chimera.slayer tree | commitdiff
2011-02-15 pschlossmods to seq.errror tree | commitdiff
2011-02-14 westcottadded make.fastq command tree | commitdiff
2011-02-14 westcottfixed catchall PATH variable bug added trimera to chime... tree | commitdiff
2011-02-09 pschlossmods to trim.seqs tree | commitdiff
2011-02-09 westcottadded mantel command tree | commitdiff
2011-02-08 pschlosschanges to trim.flows command tree | commitdiff
2011-02-08 westcottadded homova command tree | commitdiff
2011-02-08 westcottadded amova command tree | commitdiff
2011-02-07 westcottadding license tree | commitdiff
2011-02-04 westcottworking on kendall tree | commitdiff
2011-02-04 pschlossremoved trimera checking from refchimeratest tree | commitdiff
2011-02-03 westcottchanges for 1.16.0 tree | commitdiff
2011-02-03 pschloss*** empty log message *** tree | commitdiff
2011-01-26 westcottmods in testing 1.16.0 tree | commitdiff
2011-01-24 westcottadded merge.groups command tree | commitdiff
2011-01-24 westcottremove.rare command tree | commitdiff
2011-01-21 westcottmodified shhhercommand to make buildable with windows tree | commitdiff
2011-01-21 westcottadded calcs to tree.shared. working on remove.rare... tree | commitdiff
2011-01-14 westcottfixed trim.seqs bug with qtrim parameter and added... tree | commitdiff
2011-01-10 westcottpca command tree | commitdiff
2011-01-07 westcottfinished chimera.slayer adding trim parameter, added... tree | commitdiff
2011-01-05 westcottchanged filename of pcacommand to pcoacommand tree | commitdiff
2011-01-04 westcottChanged back to xcode build. tree | commitdiff
2011-01-04 westcottChanged back to xcode build. tree | commitdiff
2011-01-04 westcottChanged back to xcode build. tree | commitdiff
2011-01-04 westcottremoved parse.sff command and made its functionality... tree | commitdiff
2010-12-31 pschlossadded shhh.seqs command tree | commitdiff
2010-12-23 pschlossaddition of trim.flows tree | commitdiff
2010-12-22 westcottchimera.slayer fix tree | commitdiff
2010-12-20 pschlosspat's changes to seq.error command tree | commitdiff
2010-12-17 westcottadded odum, canberra, structchi2, structchord, structe... tree | commitdiff
2010-12-17 westcottfixed bug with trim.seqs- when a file is blank for... tree | commitdiff
2010-11-29 westcottadded consensus.seqs command tree | commitdiff
2010-11-19 westcottadded indicator command tree | commitdiff
2010-11-12 westcottadded get.otus and remove.otus commands tree | commitdiff
2010-11-10 westcottadded get.groups and remove.groups commands tree | commitdiff
2010-11-08 westcottcluster.split fix tree | commitdiff
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Mothur--16S microbiota sequencing software; mirror of main repository with my branches