modified seqerror and qualscores

diff --git a/Mothur.xcodeproj/project.pbxproj b/Mothur.xcodeproj/project.pbxproj
index ccb5aa2705f8c621ec8d8aac801c43506c110bd6..e7b832a17057bccc6a5c2647adebfcdfcaeea2ca 100644 (file)
--- a/Mothur.xcodeproj/project.pbxproj
+++ b/Mothur.xcodeproj/project.pbxproj
@@ -1625,7 +1625,7 @@
                        attributes = {
                                ORGANIZATIONNAME = "Schloss Lab";
                        };
-                       buildConfigurationList = 1DEB928908733DD80010E9CD /* Build configuration list for PBXProject "mothur" */;
+                       buildConfigurationList = 1DEB928908733DD80010E9CD /* Build configuration list for PBXProject "Mothur" */;
                        compatibilityVersion = "Xcode 3.1";
                        developmentRegion = English;
                        hasScannedForEncodings = 1;
@@ -2049,7 +2049,7 @@
                        defaultConfigurationIsVisible = 0;
                        defaultConfigurationName = Release;
                };
-               1DEB928908733DD80010E9CD /* Build configuration list for PBXProject "mothur" */ = {
+               1DEB928908733DD80010E9CD /* Build configuration list for PBXProject "Mothur" */ = {
                        isa = XCConfigurationList;
                        buildConfigurations = (
                                1DEB928A08733DD80010E9CD /* Debug */,

diff --git a/qualityscores.cpp b/qualityscores.cpp
index d57ef08ae00e6465edf2cdc17a90da26d968d4f5..fca3d9f4c9cd17947116fbdb9a872bfce863fe47 100644 (file)
--- a/qualityscores.cpp
+++ b/qualityscores.cpp
@@ -308,7 +308,6 @@ void QualityScores::updateQScoreErrorMap(map<char, vector<int> >& qualErrorMap,
        try {
 
                int seqLength = errorSeq.size();
-               cout << start << '\t' << stop << '\t' << seqLength << endl;
                
                int qIndex = start - 1;
                for(int i=0;i<seqLength;i++){