removed unused copy constructors and comments within comments that where causing nonsense warnings. Added minimum sequence length of 3 bases to correct set fault error to chimera.perseus. Fixed == bug in chop.seqs that left 'N' bases in sequence. added classify.tree command. worked on cluster.split and shhh.flows paralellization for windows, not complete. optimized shhh.flows paralellzation for mac and linux. added linker and spacer options to oligos file of trim.seqs. added ldiffs and sdiffs to allow for differences in linker and spacers in trim.seqs. added keepforward to trim.seqs to allow for keeping the forward primer.
projects / mothur.git / commit