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Fixed a bug related to intermediate output displaying in wiggle.cpp
2012-04-14 Bo LiFixed a bug related to intermediate output displaying...
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2012-04-14 Bo LiFixed a bug related to intermediate output displaying...
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2012-03-21 Bo LiAllowed > 2^31 hits
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2012-03-11 Bo LiModified makefile to work for gcc version 4.5.3 or...
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2012-03-11 Bo LiModified 'convert-sam-for-rsem' so that this program...
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2012-03-11 Bo LiAdd a validator for input SAM/BAM file
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2012-03-09 Bo LiImproved warning messages in rsem-gen-transcript-plots
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2012-03-09 Bo LiAdd warning messages for detected invalid alignments
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2012-02-19 Bo Li[Change] Do not add --phred33-qual option if --no-qualities...
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2012-02-09 Bo LiThe order of @SQ tags in SAM/BAM files can be arbitrary now
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2012-02-08 Bo Liadd --no-bam-output option to not generate output bam...
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2012-02-08 Bo Liroll back to original version plus fixed a small bug...
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2012-02-08 Bo Lirewrote parallelization of calcCI.cpp
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2012-01-31 Bo Lirsem v1.1.16
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2012-01-26 Bo Lirsem v1.1.15
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2012-01-18 Bo Lirsem v1.1.14
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2011-12-31 Bo Lirelax the requirement about GTF attribute format
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2011-12-14 Bo Limodify one error message and add --bowtie-chunkmbs...
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2011-12-14 Bo LiMerge remote-tracking branch 'origin/master'
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2011-12-14 Bo Lianother change
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2011-12-10 Bo Liupdated some description
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2011-12-10 Bo Linew update
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2011-12-09 Bo Liconvert-sam-for-rsem is updated
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2011-12-09 Bo Liadd a script to convert sam file for non-bowtie aligner
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2011-12-04 Bo Lirsem-v1.1.14b3
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2011-12-02 Bo Lirsem-1.1.14 with transcript wiggle plot generation
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2011-12-01 Bo Liadd new files
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2011-11-28 Bo Litested version for tbam2gbam
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2011-11-11 Bo Lisome displaying issue in rsem-calculate-expression...
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2011-11-11 Bo Liadd optional field XS for cufflinks
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2011-11-10 Bo Lirsem v1.1.14, add --sampling-for-bam option, modify...
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2011-11-06 Bo Lirsem v1.1.13, speed up EM by only updating model parameters...
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2011-10-19 Bo Lirsem v1.1.12 extract-transcript-to-gene-map-from-trinity...
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2011-10-19 Bo Lirsem v1.1.12, add a script to extract transcript-to...
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2011-08-25 Bo Lirsem v1.1.11, allow spaces appear in field seqname...
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2011-08-25 Bo Lirsem v1.1.11
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2011-08-12 Bo Lifix one bug will lead using not the last theta value...
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2011-08-11 Bo Lirsem v1.2.0
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2011-07-26 Bo LiMAPQ changed
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2011-05-27 Bo Lirsem v1.1.9
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2011-05-24 Bo Lirsem-plot-model updated
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2011-04-26 Bo Lifixed a bug in rsem-plot-model
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2011-04-25 Bo Liadd feature that jump lines with # in gtf
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2011-04-25 Bo Li back to single threaded Gibbs
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2011-04-25 Bo Liback to single thread Gibbs
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2011-04-25 Bo LiVersion with Gibbs parallelized
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2011-04-21 Bo Li a bug in simulation.cpp is fixed.
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2011-04-21 Bo Lia bug in *?Model.h was fixed.
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2011-04-19 Bo Lisome changes
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2011-04-18 Bo LiRSEM v1.1.8
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2011-04-18 Bo LiRSEM v1.1.8
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2011-04-17 Bo Lilots of changes
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2011-04-09 Bo Lifixed a bug for transcript set as reference
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2011-04-02 Bo Lifix a bug in partition reads for parallel
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2011-03-22 Bo LiREADME.md is updated to include C++, Perl and R as...
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2011-03-18 Bo Lia bug in rsem-plot-model is fixed
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2011-03-18 Bo Liv1.1.5.b
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2011-03-17 Bo LiFixed bugs in the Gibbs sampler. Fixed a bug which...
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2011-03-15 Bo Lirsem-plot-model was changed again
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2011-03-15 Bo Lirsem-plot-model was modified
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2011-03-11 Bo Lirename plotModel.R to rsem-plot-model
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2011-03-11 Bo LiREADME.md changed
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2011-03-11 Bo LiEnable RSEM to visualize the model learned from data
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2011-03-09 Bo LiFixed a bug related to output format. Grant read permession...
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2011-02-21 Bo LiREADME.md modified
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2011-02-21 Bo LiREADME.md
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2011-02-21 Bo LiREADME.md modified to display correctly in github
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2011-02-21 Bo LiREADME.md changed
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2011-02-17 Bo Lichange README.txt to README.md
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2011-02-17 Bo Lichange README.txt to README.md
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2011-02-17 Bo Liv1.1.2
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2011-02-17 Bo LiNormalized Read Fraction(nrf) are eliminated from outputs...
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2011-02-17 Bo LiNormalized Read Fraction(nrf) are eliminated from outputs...
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2011-02-11 Bo LiBugs in SingleModel.h are fixed.
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2011-02-09 Bo LiRSEM Source Codes
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Debian packaging of rsem