]> git.donarmstrong.com Git - rsem.git/commit
projects / rsem.git / commit
? search:
summary | shortlog | log | commit | commitdiff | tree
(parent: 5b86789) | patch
rsem v1.1.13, speed up EM by only updating model parameters for first 10 iterations...
authorBo Li <bli@cs.wisc.edu>
Sun, 6 Nov 2011 00:02:05 +0000 (19:02 -0500)
committerBo Li <bli@cs.wisc.edu>
Sun, 6 Nov 2011 00:02:05 +0000 (19:02 -0500)
commit86e650e9577999a7ba00ab454d1f6bf674b0ea70
tree1f27e28f11e1f8ee6f681a28210d1a2231dc16d4tree | snapshot
parent5b867894f164d9fa3fbc1a8e659b34890b977716commit | diff
rsem v1.1.13, speed up EM by only updating model parameters for first 10 iterations, skip reads with its (or at least one of its mates', for paired-end reads) length < 25bp
13 files changed:
EM.cpp diff | blob | history
LenDist.h diff | blob | history
NoiseProfile.h diff | blob | history
PairedEndModel.h diff | blob | history
PairedEndQModel.h diff | blob | history
PairedEndRead.h diff | blob | history
PairedEndReadQ.h diff | blob | history
SingleModel.h diff | blob | history
SingleQModel.h diff | blob | history
SingleRead.h diff | blob | history
SingleReadQ.h diff | blob | history
buildReadIndex.cpp diff | blob | history
rsem-calculate-expression diff | blob | history
Debian packaging of rsem