]> git.donarmstrong.com Git - mothur.git/history - Mothur.xcodeproj/project.pbxproj
added a few evenness calculators and fixed a couple of bugs in filter.seqs and pre...
[mothur.git] / Mothur.xcodeproj / project.pbxproj
2010-08-23 pschlossadded a few evenness calculators and fixed a couple...
2010-08-20 westcottmodified precluster to use less memory.
2010-08-19 westcottmodified calculators to use doubles, added numotu and...
2010-07-22 westcottfixes while testing 1.12.0
2010-07-19 westcottadded ordergroup parameter to read.otu
2010-07-19 pschlosspat's updates on 7/19/10
2010-07-14 pschlosspat's changes to trim.seqs
2010-07-14 westcottstarted work on sffinfo command. fixed bug across...
2010-07-06 pschlosssens.spec changes
2010-06-22 westcottadded mpi code to cluster.split command
2010-06-21 westcottadded degap.seqs command
2010-06-21 westcottmodified chimera commands to process multiple fasta...
2010-06-14 westcottfixed pintail bug
2010-06-09 pschlossadded weightedlinkage.cpp
2010-06-02 westcottadded sort parameter to get.otulist
2010-06-02 westcottadded classify.otu command
2010-05-27 westcottfixed project
2010-05-26 pschlossfixed bugs with trim.seqs and bdiffs
2010-05-20 westcottadded cluster.split command
2010-05-18 westcottadded split.abund comand
2010-05-12 westcottmodified freq parameter be a percentage of numSeqs...
2010-05-11 westcottadded clearcut command
2010-05-10 westcottadded chop.seqs command
2010-05-10 westcottadded make.group command
2010-05-07 westcottmodified trim.seqs to account for primers of different...
2010-05-04 westcottadded phylo.diversity command. added hard parameter...
2010-04-30 westcottparalellized trim.seqs
2010-04-28 westcottadded set.logfile command
2010-04-27 westcottreworked the classifiers summary file added groupfile...
2010-04-26 westcottmade classifier faster
2010-04-14 pschlosspat's minor edits to distance calculations
2010-04-14 westcottsome changes while testing 1.9
2010-04-07 westcottadded MPI code, broke up chimera.seqs into 5 separated...
2010-03-12 westcottadded MPI to dist.seqs command
2010-03-04 westcottmothur with external build
2010-03-04 westcottchanges to filter.seqs
2010-02-26 westcottcreated mothurOut class to handle logfiles
2010-02-25 westcottadded parse.list command
2010-02-12 westcottworking on chimeras
2010-02-02 westcottfixed bugs for 1.8
2010-01-27 westcottadded distance search method to classify.seqs
2010-01-26 westcottadded set.dir command and modified commands to redirect...
2010-01-19 westcottadded out.hierarchy command
2010-01-19 pschlosspat's mods to morisitahorn and pre.cluster
2010-01-14 westcottadded formatmatrix, formatcolumn, and formatphylip...
2010-01-04 westcottadded pca command
2009-12-23 westcottprecluster command finished
2009-12-21 westcottfixed some bugs and added mgcluster command
2009-12-09 westcottadded sorted parameter to get.oturep, added error check...
2009-12-08 westcottadded list parameter to get.seqs and remove.seqs and...
2009-11-25 pschlossversion for 10.5
2009-11-24 pschlossfixed splash page citation
2009-11-23 westcottadded phylotype command which reads a taxonomy file...
2009-11-17 westcottfinal fixes for 1.7
2009-11-13 westcottfinished work on classify.seqs bayesian method and...
2009-11-05 westcottstarted work on classify.seqs command. changed the...
2009-10-29 westcottadded hcluster command and fixed some bugs, namely...
2009-10-12 westcottfinished chimeraslayer method and added get.listcount...
2009-09-28 westcottstarted adding chimeraslayer method and fixed minor...
2009-09-23 westcottadded get.sharedotu command
2009-09-18 westcottadding more error checking for list and group files...
2009-09-15 westcottfixed some issues while testing 1.6
2009-09-09 westcottcontinued work on chimeras and fixed bug in trim.seqs...
2009-09-01 westcottchanged raredisplay to use vectors instead of files
2009-09-01 westcottadded more descriptive error messages to sharedlist
2009-08-31 westcottchecking in chimera files in progress after move to...
2009-08-12 westcottremoving mallard
2009-08-11 westcottchimera.seqs pintail is working.
2009-08-10 pschlossmothur-v.1.5.0
2009-07-30 pschlosspat's edits prior to v.1.5
2009-07-26 westcottfixed bug with aligner in database class, worked on...
2009-07-22 westcottworked on chimeras
2009-07-10 westcottadded sorted option to get.rabund command
2009-07-08 westcottadded stricter compilation requirements and fixed resul...
2009-07-08 westcottadded system command
2009-07-08 westcottadded remove.seqs command
2009-07-08 westcottadded get.seqs command
2009-07-08 westcottadded list.seqs command
2009-07-02 westcottmade changes to concensus to find a better tree. also...
2009-06-29 westcottfixed misspelling on consensus
2009-06-29 westcottmodified read.otu and shared command
2009-06-22 westcottworked on parselist and shared commands, removing memor...
2009-06-21 pschlossThis is v.1.4.0
2009-06-16 pschlossa few minor things - pds
2009-06-15 westcottfixing minor bugs
2009-06-15 westcottremoved validcommands and put its checking in commandfa...
2009-06-14 pschlossmerged pat's trim seqs edits with sarah's major overhau...
2009-06-12 westcottbroke up globaldata and moved error checking and help...
2009-06-08 westcottadded heatmap.sim command and changed heatmap to heatma...
2009-06-08 pschlossadded some features to trim.seqs
2009-06-06 pschlossadded trim.seqs command
2009-06-06 pschlossadded reverse.seqs command
2009-06-04 pschlossremove some files
2009-06-04 westcottremoved readseqs, readfasta, readnexus, readclustal...
2009-06-04 pschlossmodified filter.seqs to not store all seqs in memory...
2009-06-04 westcottfixed some bugs
2009-06-03 westcottadded get.rabund and get.sabund command and fixed bug...
2009-06-03 pschlossaddition of summary.seq command [pds]
2009-05-24 pschlossThis contains Pat's bug fixes and updates. It represen...
2009-05-21 westcottmodified bin.seqs and get.oturep commands to include...
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