| 2011-02-25 |
westcott | added root parameter to the unifrac commands so you...
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commit | commitdiff | tree |
| 2011-02-23 |
westcott | fixed bug in unifrac commands with nexus translation...
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commit | commitdiff | tree |
| 2011-02-23 |
westcott | fixed bug in unifrac commands with nexus translation...
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commit | commitdiff | tree |
| 2011-02-23 |
westcott | fixed bug in unifrac commands with unrooted trees
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commit | commitdiff | tree |
| 2011-02-23 |
westcott | fixed bug in unifrac commands with unrooted trees
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commit | commitdiff | tree |
| 2011-02-18 |
westcott | fixed unifrac bug with multiple processors if numComps...
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commit | commitdiff | tree |
| 2011-02-15 |
westcott | finished anosim command
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commit | commitdiff | tree |
| 2011-02-15 |
westcott | working on anosim command
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commit | commitdiff | tree |
| 2011-02-15 |
westcott | finished the chimera.slayer split function
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commit | commitdiff | tree |
| 2011-02-15 |
westcott | fixed mpi version compile issue with chimera.slayer
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commit | commitdiff | tree |
| 2011-02-14 |
westcott | added make.fastq command
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commit | commitdiff | tree |
| 2011-02-14 |
westcott | fixed catchall PATH variable bug added trimera to chimera...
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commit | commitdiff | tree |
| 2011-02-09 |
westcott | added mantel command
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commit | commitdiff | tree |
| 2011-02-09 |
westcott | added mantel command
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commit | commitdiff | tree |
| 2011-02-08 |
westcott | added [ERROR] flag if command aborts
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commit | commitdiff | tree |
| 2011-02-08 |
westcott | fixed homova command
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commit | commitdiff | tree |
| 2011-02-08 |
westcott | added homova command
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commit | commitdiff | tree |
| 2011-02-08 |
westcott | added homova command
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commit | commitdiff | tree |
| 2011-02-08 |
westcott | added amova command
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commit | commitdiff | tree |
| 2011-02-08 |
westcott | added amova command
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commit | commitdiff | tree |
| 2011-02-08 |
westcott | added amova command
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commit | commitdiff | tree |
| 2011-02-07 |
westcott | adding license
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commit | commitdiff | tree |
| 2011-02-04 |
westcott | fixed kendall method in corr.axes
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commit | commitdiff | tree |
| 2011-02-04 |
westcott | working on kendall
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commit | commitdiff | tree |
| 2011-02-04 |
westcott | fixed catchall hangup if it can't find the exe
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commit | commitdiff | tree |
| 2011-02-03 |
westcott | corr.axes spearman
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commit | commitdiff | tree |
| 2011-02-03 |
westcott | changes for 1.16.0
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commit | commitdiff | tree |
| 2011-01-26 |
westcott | fixed mempearson and structpearson
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commit | commitdiff | tree |
| 2011-01-26 |
westcott | mods in testing 1.16.0
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commit | commitdiff | tree |
| 2011-01-25 |
westcott | mods for 1.16
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commit | commitdiff | tree |
| 2011-01-24 |
westcott | added merge.groups command
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commit | commitdiff | tree |
| 2011-01-24 |
westcott | added zscore method to normalize.shared
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commit | commitdiff | tree |
| 2011-01-24 |
westcott | remove.rare command
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commit | commitdiff | tree |
| 2011-01-21 |
westcott | modified shhhercommand to make buildable with windows
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commit | commitdiff | tree |
| 2011-01-21 |
westcott | added calcs to tree.shared. working on remove.rare...
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commit | commitdiff | tree |
| 2011-01-21 |
westcott | added diffs and percent parameters to cluster.fragments...
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commit | commitdiff | tree |
| 2011-01-21 |
westcott | nmds command done
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commit | commitdiff | tree |
| 2011-01-21 |
westcott | working on nmds
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commit | commitdiff | tree |
| 2011-01-21 |
westcott | working on nmds
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commit | commitdiff | tree |
| 2011-01-19 |
westcott | working on nmds command
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commit | commitdiff | tree |
| 2011-01-19 |
westcott | working on nmds command
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commit | commitdiff | tree |
| 2011-01-14 |
westcott | fixed trim.seqs bug with qtrim parameter and added...
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commit | commitdiff | tree |
| 2011-01-10 |
westcott | pca command
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commit | commitdiff | tree |
| 2011-01-10 |
westcott | pca command
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commit | commitdiff | tree |
| 2011-01-07 |
westcott | finished chimera.slayer adding trim parameter, added...
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commit | commitdiff | tree |
| 2011-01-07 |
westcott | working on chimera change to add trim feature, fixed...
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commit | commitdiff | tree |
| 2011-01-05 |
westcott | added pearson coefficient metric to pcoa
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commit | commitdiff | tree |
| 2011-01-05 |
westcott | changed filename of pcacommand to pcoacommand
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commit | commitdiff | tree |
| 2011-01-05 |
westcott | removed various build warnings
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commit | commitdiff | tree |
| 2011-01-05 |
westcott | added metadata file as input to corr.axes
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commit | commitdiff | tree |
| 2011-01-04 |
westcott | Changed back to xcode build.
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commit | commitdiff | tree |
| 2011-01-04 |
westcott | Changed back to xcode build.
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commit | commitdiff | tree |
| 2011-01-04 |
westcott | Changed back to xcode build.
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commit | commitdiff | tree |
| 2011-01-04 |
westcott | removed parse.sff command and made its functionality...
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commit | commitdiff | tree |
| 2011-01-03 |
westcott | added template=self capability to chimers.slayer, worked...
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commit | commitdiff | tree |
| 2010-12-23 |
westcott | fixed memory leak in maligner minCoverageFilter function...
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commit | commitdiff | tree |
| 2010-12-23 |
westcott | fixed memory leak in decalc findClosest function used...
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commit | commitdiff | tree |
| 2010-12-22 |
westcott | chimera.slayer fix
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commit | commitdiff | tree |
| 2010-12-22 |
westcott | fixed trim.seqs weird characters thing
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commit | commitdiff | tree |
| 2010-12-22 |
westcott | added output filenames and m->control_pressed stuff...
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commit | commitdiff | tree |
| 2010-12-17 |
westcott | added design parameter to the indicator command
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commit | commitdiff | tree |
| 2010-12-17 |
westcott | added odum, canberra, structchi2, structchord, structeuclid...
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commit | commitdiff | tree |
| 2010-12-17 |
westcott | fixed bug with trim.seqs- when a file is blank for...
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commit | commitdiff | tree |
| 2010-12-14 |
westcott | added confidence scores to get.lineage and remove.lineage
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commit | commitdiff | tree |
| 2010-12-13 |
westcott | added summary file to classify.otu
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commit | commitdiff | tree |
| 2010-12-13 |
westcott | classify.seqs summary file fix
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commit | commitdiff | tree |
| 2010-12-10 |
westcott | rolled back metastats workspace change
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commit | commitdiff | tree |
| 2010-12-10 |
westcott | added shared file to catchall command
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commit | commitdiff | tree |
| 2010-12-08 |
westcott | metastats double* to double fix for windows
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commit | commitdiff | tree |
| 2010-12-08 |
westcott | consensus.seqs summary file change
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commit | commitdiff | tree |
| 2010-12-08 |
westcott | get.oturep ifstream
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commit | commitdiff | tree |
| 2010-12-08 |
westcott | get.oturep change and trim.seqs fix
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commit | commitdiff | tree |
| 2010-12-08 |
westcott | catchall windows fix
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commit | commitdiff | tree |
| 2010-12-07 |
westcott | consensus.seqs can now find a consensus on a whole...
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commit | commitdiff | tree |
| 2010-12-07 |
westcott | fixed indicator grouping problem
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commit | commitdiff | tree |
| 2010-12-06 |
westcott | modified trim.seqs to speed up the append with multiple...
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commit | commitdiff | tree |
| 2010-12-06 |
westcott | added summary output to catchall command
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commit | commitdiff | tree |
| 2010-12-03 |
westcott | fixed indicator command bug
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commit | commitdiff | tree |
| 2010-12-03 |
westcott | fixed craig nelsons weighted bug and paralellized parsimony
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commit | commitdiff | tree |
| 2010-11-29 |
westcott | added consensus.seqs command
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commit | commitdiff | tree |
| 2010-11-22 |
westcott | finished wrapper for catchall
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commit | commitdiff | tree |
| 2010-11-22 |
westcott | added group option to trim.seqs so you can provide...
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commit | commitdiff | tree |
| 2010-11-19 |
westcott | added indicator command
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commit | commitdiff | tree |
| 2010-11-12 |
westcott | added get.otus and remove.otus commands
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commit | commitdiff | tree |
| 2010-11-10 |
westcott | added get.groups and remove.groups commands
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commit | commitdiff | tree |
| 2010-11-10 |
westcott | finished sub.sample command
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commit | commitdiff | tree |
| 2010-11-09 |
westcott | parsimony calculator changed order of groups to reflect...
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commit | commitdiff | tree |
| 2010-11-08 |
westcott | changes to dist.seqs and pairwise.seqs and cluster...
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commit | commitdiff | tree |
| 2010-11-08 |
westcott | fixed cluster.split bug
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commit | commitdiff | tree |
| 2010-11-08 |
westcott | cluster.split fix
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commit | commitdiff | tree |
| 2010-11-05 |
westcott | fixed metastats, added resize to cluster.classic, added...
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commit | commitdiff | tree |
| 2010-11-05 |
westcott | cluster.split fix
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commit | commitdiff | tree |
| 2010-11-02 |
westcott | changed cluster.classic so that it does not adjust...
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commit | commitdiff | tree |
| 2010-11-02 |
westcott | fixed bug with normalize.shared, printed out numbins...
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commit | commitdiff | tree |
| 2010-11-02 |
westcott | fixed cluster.classic and added weighted method to...
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commit | commitdiff | tree |
| 2010-10-29 |
westcott | added cluster.classic command
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commit | commitdiff | tree |
| 2010-10-29 |
westcott | added cluster.classic command
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commit | commitdiff | tree |
| 2010-10-27 |
westcott | fixed helps
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commit | commitdiff | tree |
| 2010-10-27 |
westcott | fixing helps
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commit | commitdiff | tree |
| 2010-10-26 |
westcott | done testing 1.14.0
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commit | commitdiff | tree |
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