| 2011-01-05 |
westcott | added pearson coefficient metric to pcoa
|
commit | commitdiff | tree |
| 2011-01-05 |
westcott | changed filename of pcacommand to pcoacommand
|
commit | commitdiff | tree |
| 2011-01-05 |
westcott | removed various build warnings
|
commit | commitdiff | tree |
| 2011-01-05 |
westcott | added metadata file as input to corr.axes
|
commit | commitdiff | tree |
| 2011-01-04 |
westcott | Changed back to xcode build.
|
commit | commitdiff | tree |
| 2011-01-04 |
westcott | Changed back to xcode build.
|
commit | commitdiff | tree |
| 2011-01-04 |
westcott | Changed back to xcode build.
|
commit | commitdiff | tree |
| 2011-01-04 |
westcott | removed parse.sff command and made its functionality...
|
commit | commitdiff | tree |
| 2011-01-03 |
westcott | added template=self capability to chimers.slayer, worked...
|
commit | commitdiff | tree |
| 2010-12-23 |
westcott | fixed memory leak in maligner minCoverageFilter function...
|
commit | commitdiff | tree |
| 2010-12-23 |
westcott | fixed memory leak in decalc findClosest function used...
|
commit | commitdiff | tree |
| 2010-12-22 |
westcott | chimera.slayer fix
|
commit | commitdiff | tree |
| 2010-12-22 |
westcott | fixed trim.seqs weird characters thing
|
commit | commitdiff | tree |
| 2010-12-22 |
westcott | added output filenames and m->control_pressed stuff...
|
commit | commitdiff | tree |
| 2010-12-17 |
westcott | added design parameter to the indicator command
|
commit | commitdiff | tree |
| 2010-12-17 |
westcott | added odum, canberra, structchi2, structchord, structeuclid...
|
commit | commitdiff | tree |
| 2010-12-17 |
westcott | fixed bug with trim.seqs- when a file is blank for...
|
commit | commitdiff | tree |
| 2010-12-14 |
westcott | added confidence scores to get.lineage and remove.lineage
|
commit | commitdiff | tree |
| 2010-12-13 |
westcott | added summary file to classify.otu
|
commit | commitdiff | tree |
| 2010-12-13 |
westcott | classify.seqs summary file fix
|
commit | commitdiff | tree |
| 2010-12-10 |
westcott | rolled back metastats workspace change
|
commit | commitdiff | tree |
| 2010-12-10 |
westcott | added shared file to catchall command
|
commit | commitdiff | tree |
| 2010-12-08 |
westcott | metastats double* to double fix for windows
|
commit | commitdiff | tree |
| 2010-12-08 |
westcott | consensus.seqs summary file change
|
commit | commitdiff | tree |
| 2010-12-08 |
westcott | get.oturep ifstream
|
commit | commitdiff | tree |
| 2010-12-08 |
westcott | get.oturep change and trim.seqs fix
|
commit | commitdiff | tree |
| 2010-12-08 |
westcott | catchall windows fix
|
commit | commitdiff | tree |
| 2010-12-07 |
westcott | consensus.seqs can now find a consensus on a whole...
|
commit | commitdiff | tree |
| 2010-12-07 |
westcott | fixed indicator grouping problem
|
commit | commitdiff | tree |
| 2010-12-06 |
westcott | modified trim.seqs to speed up the append with multiple...
|
commit | commitdiff | tree |
| 2010-12-06 |
westcott | added summary output to catchall command
|
commit | commitdiff | tree |
| 2010-12-03 |
westcott | fixed indicator command bug
|
commit | commitdiff | tree |
| 2010-12-03 |
westcott | fixed craig nelsons weighted bug and paralellized parsimony
|
commit | commitdiff | tree |
| 2010-11-29 |
westcott | added consensus.seqs command
|
commit | commitdiff | tree |
| 2010-11-22 |
westcott | finished wrapper for catchall
|
commit | commitdiff | tree |
| 2010-11-22 |
westcott | added group option to trim.seqs so you can provide...
|
commit | commitdiff | tree |
| 2010-11-19 |
westcott | added indicator command
|
commit | commitdiff | tree |
| 2010-11-12 |
westcott | added get.otus and remove.otus commands
|
commit | commitdiff | tree |
| 2010-11-10 |
westcott | added get.groups and remove.groups commands
|
commit | commitdiff | tree |
| 2010-11-10 |
westcott | finished sub.sample command
|
commit | commitdiff | tree |
| 2010-11-09 |
westcott | parsimony calculator changed order of groups to reflect...
|
commit | commitdiff | tree |
| 2010-11-08 |
westcott | changes to dist.seqs and pairwise.seqs and cluster...
|
commit | commitdiff | tree |
| 2010-11-08 |
westcott | fixed cluster.split bug
|
commit | commitdiff | tree |
| 2010-11-08 |
westcott | cluster.split fix
|
commit | commitdiff | tree |
| 2010-11-05 |
westcott | fixed metastats, added resize to cluster.classic, added...
|
commit | commitdiff | tree |
| 2010-11-05 |
westcott | cluster.split fix
|
commit | commitdiff | tree |
| 2010-11-02 |
westcott | changed cluster.classic so that it does not adjust...
|
commit | commitdiff | tree |
| 2010-11-02 |
westcott | fixed bug with normalize.shared, printed out numbins...
|
commit | commitdiff | tree |
| 2010-11-02 |
westcott | fixed cluster.classic and added weighted method to...
|
commit | commitdiff | tree |
| 2010-10-29 |
westcott | added cluster.classic command
|
commit | commitdiff | tree |
| 2010-10-29 |
westcott | added cluster.classic command
|
commit | commitdiff | tree |
| 2010-10-27 |
westcott | fixed helps
|
commit | commitdiff | tree |
| 2010-10-27 |
westcott | fixing helps
|
commit | commitdiff | tree |
| 2010-10-26 |
westcott | done testing 1.14.0
|
commit | commitdiff | tree |
| 2010-10-26 |
westcott | done testing 1.14.0
|
commit | commitdiff | tree |
| 2010-10-26 |
westcott | fixes while testing
|
commit | commitdiff | tree |
| 2010-10-25 |
westcott | added remove file option to pipeline command in user...
|
commit | commitdiff | tree |
| 2010-10-25 |
westcott | testing 1.14.0
|
commit | commitdiff | tree |
| 2010-10-25 |
westcott | testing 1.14.0
|
commit | commitdiff | tree |
| 2010-10-20 |
westcott | added pairwise.seqs
|
commit | commitdiff | tree |
| 2010-10-19 |
westcott | fixed bug with aligner and longest base. added deunique...
|
commit | commitdiff | tree |
| 2010-10-19 |
westcott | fixed phylo.diversity and made trim.seqs with allfiles...
|
commit | commitdiff | tree |
| 2010-10-18 |
westcott | fixed unifrac.weighted
|
commit | commitdiff | tree |
| 2010-10-18 |
westcott | fixed unifrac.unweighted
|
commit | commitdiff | tree |
| 2010-10-18 |
westcott | added ifdefs for extern c
|
commit | commitdiff | tree |
| 2010-10-18 |
westcott | testing metastats compile
|
commit | commitdiff | tree |
| 2010-10-15 |
westcott | added pipeline commands which involved change to command...
|
commit | commitdiff | tree |
| 2010-10-05 |
westcott | paralellized phylo.diversity
|
commit | commitdiff | tree |
| 2010-10-04 |
westcott | paralellized rarefaction.single
|
commit | commitdiff | tree |
| 2010-10-04 |
westcott | changed name of parse.fastaq command to fastq.info
|
commit | commitdiff | tree |
| 2010-09-30 |
westcott | added parse.fastaq command, added permute option to...
|
commit | commitdiff | tree |
| 2010-09-28 |
westcott | added distance option to summary.shared
|
commit | commitdiff | tree |
| 2010-09-24 |
westcott | added get.lineage and remove.lineage commands
|
commit | commitdiff | tree |
| 2010-09-23 |
westcott | fixed order of unifrac commands so that it matches...
|
commit | commitdiff | tree |
| 2010-09-23 |
westcott | added cluster.fragments command as well as the nseqs...
|
commit | commitdiff | tree |
| 2010-09-21 |
westcott | added mothur executable to cvs
|
commit | commitdiff | tree |
| 2010-09-21 |
westcott | added split.groups command
|
commit | commitdiff | tree |
| 2010-09-20 |
westcott | changed how we name the make.group groups file, and...
|
commit | commitdiff | tree |
| 2010-09-17 |
westcott | bug fixes
|
commit | commitdiff | tree |
| 2010-09-17 |
westcott | bug fixes
|
commit | commitdiff | tree |
| 2010-09-17 |
westcott | working on megastats
|
commit | commitdiff | tree |
| 2010-09-16 |
westcott | initial add of metastats
|
commit | commitdiff | tree |
| 2010-09-15 |
westcott | added normalize.shared command
|
commit | commitdiff | tree |
| 2010-09-15 |
westcott | added normalize.shared command
|
commit | commitdiff | tree |
| 2010-09-15 |
westcott | paralellized summary.shared
|
commit | commitdiff | tree |
| 2010-09-09 |
westcott | done testing 1.13.0
|
commit | commitdiff | tree |
| 2010-09-08 |
westcott | testing 1.13.0
|
commit | commitdiff | tree |
| 2010-09-04 |
westcott | working on testing for 1.13
|
commit | commitdiff | tree |
| 2010-09-03 |
westcott | working on testing
|
commit | commitdiff | tree |
| 2010-09-01 |
westcott | unifrac parallelization done, changed dist.seqs output...
|
commit | commitdiff | tree |
| 2010-09-01 |
westcott | working on unifrac parallelization
|
commit | commitdiff | tree |
| 2010-08-31 |
westcott | working on parallelizing unifrac.unweighted.
|
commit | commitdiff | tree |
| 2010-08-31 |
westcott | working on parallelizing unifrac.weighted.
|
commit | commitdiff | tree |
| 2010-08-30 |
westcott | sped up unifrac unweighted.
|
commit | commitdiff | tree |
| 2010-08-30 |
westcott | sped up unifrac weighted.
|
commit | commitdiff | tree |
| 2010-08-27 |
westcott | made read.tree not require a groupfile, if one is not...
|
commit | commitdiff | tree |
| 2010-08-27 |
westcott | fixed phylo.diversity
|
commit | commitdiff | tree |
| 2010-08-27 |
westcott | fixed phylo.diversity
|
commit | commitdiff | tree |
| 2010-08-26 |
westcott | added clearcut source to mothur, fixed mislabeled sharedcalcs
|
commit | commitdiff | tree |
| 2010-08-26 |
westcott | added clearcut source to mothur, fixed mislabeled sharedcalcs
|
commit | commitdiff | tree |
| next |
projects / mothur.git / search