]> git.donarmstrong.com Git - mothur.git/commit
added sets to amova and homova commands. added oligos to make.contigs. added metadat...
authorSarah Westcott <mothur.westcott@gmail.com>
Mon, 22 Oct 2012 15:40:41 +0000 (11:40 -0400)
committerSarah Westcott <mothur.westcott@gmail.com>
Mon, 22 Oct 2012 15:40:41 +0000 (11:40 -0400)
commita9dbc22713bfc056a797361dd757b1a5c98e1c01
tree2db4c9a458bab8cf0160d7db81047ad61d6ca440
parente10c72304ee071c0c40e0218a06d89dc4731cbc2
added sets to amova and homova commands.  added oligos to make.contigs. added metadata to make.biom. fixed bug in get.oturep caused by adding the count file. changed vector declaration in cooccurrence to fixed windows issue. classify.seqs can now ignore seqs in taxonomy file not in template file.
37 files changed:
alignmentdb.cpp
alignnode.cpp
amovacommand.cpp
amovacommand.h
chimerauchimecommand.cpp
classify.cpp
classifyseqscommand.cpp
classifyseqscommand.h
consensusseqscommand.cpp
cooccurrencecommand.cpp
corraxescommand.cpp
formatcolumn.cpp
formatcolumn.h
formatmatrix.h
formatphylip.cpp
formatphylip.h
getoturepcommand.cpp
heatmapcommand.cpp
homovacommand.cpp
homovacommand.h
makebiomcommand.cpp
makebiomcommand.h
makecontigscommand.cpp
makecontigscommand.h
mothurout.cpp
mothurout.h
otuassociationcommand.cpp
otuassociationcommand.h
phylotypecommand.cpp
seqsummarycommand.cpp
sequence.cpp
sharedrabundfloatvector.cpp
subsample.cpp
trimoligos.cpp
trimoligos.h
trimseqscommand.cpp
unifracweightedcommand.cpp