2010-12-14 |
westcott | added confidence scores to get.lineage and remove.lineage |
commit | commitdiff | tree | snapshot |
2010-12-13 |
westcott | added summary file to classify.otu |
commit | commitdiff | tree | snapshot |
2010-12-13 |
westcott | classify.seqs summary file fix |
commit | commitdiff | tree | snapshot |
2010-12-10 |
westcott | rolled back metastats workspace change |
commit | commitdiff | tree | snapshot |
2010-12-10 |
westcott | added shared file to catchall command |
commit | commitdiff | tree | snapshot |
2010-12-08 |
westcott | metastats double* to double fix for windows |
commit | commitdiff | tree | snapshot |
2010-12-08 |
westcott | consensus.seqs summary file change |
commit | commitdiff | tree | snapshot |
2010-12-08 |
westcott | get.oturep ifstream |
commit | commitdiff | tree | snapshot |
2010-12-08 |
westcott | get.oturep change and trim.seqs fix |
commit | commitdiff | tree | snapshot |
2010-12-08 |
westcott | catchall windows fix |
commit | commitdiff | tree | snapshot |
2010-12-07 |
westcott | consensus.seqs can now find a consensus on a whole... |
commit | commitdiff | tree | snapshot |
2010-12-07 |
pschloss | changes to seqerrorcommand |
commit | commitdiff | tree | snapshot |
2010-12-07 |
westcott | fixed indicator grouping problem |
commit | commitdiff | tree | snapshot |
2010-12-06 |
westcott | modified trim.seqs to speed up the append with multiple... |
commit | commitdiff | tree | snapshot |
2010-12-06 |
westcott | added summary output to catchall command |
commit | commitdiff | tree | snapshot |
2010-12-03 |
westcott | fixed indicator command bug |
commit | commitdiff | tree | snapshot |
2010-12-03 |
westcott | fixed craig nelsons weighted bug and paralellized parsimony |
commit | commitdiff | tree | snapshot |
2010-11-29 |
westcott | added consensus.seqs command |
commit | commitdiff | tree | snapshot |
2010-11-22 |
westcott | finished wrapper for catchall |
commit | commitdiff | tree | snapshot |
2010-11-22 |
westcott | added group option to trim.seqs so you can provide... |
commit | commitdiff | tree | snapshot |
2010-11-19 |
westcott | added indicator command |
commit | commitdiff | tree | snapshot |
2010-11-12 |
westcott | added get.otus and remove.otus commands |
commit | commitdiff | tree | snapshot |
2010-11-10 |
westcott | added get.groups and remove.groups commands |
commit | commitdiff | tree | snapshot |
2010-11-10 |
westcott | finished sub.sample command |
commit | commitdiff | tree | snapshot |
2010-11-09 |
westcott | parsimony calculator changed order of groups to reflect... |
commit | commitdiff | tree | snapshot |
2010-11-08 |
westcott | changes to dist.seqs and pairwise.seqs and cluster... |
commit | commitdiff | tree | snapshot |
2010-11-08 |
westcott | fixed cluster.split bug |
commit | commitdiff | tree | snapshot |
2010-11-08 |
westcott | cluster.split fix |
commit | commitdiff | tree | snapshot |
2010-11-05 |
westcott | fixed metastats, added resize to cluster.classic, added... |
commit | commitdiff | tree | snapshot |
2010-11-05 |
westcott | cluster.split fix |
commit | commitdiff | tree | snapshot |
2010-11-02 |
westcott | changed cluster.classic so that it does not adjust... |
commit | commitdiff | tree | snapshot |
2010-11-02 |
westcott | fixed bug with normalize.shared, printed out numbins... |
commit | commitdiff | tree | snapshot |
2010-11-02 |
westcott | fixed cluster.classic and added weighted method to... |
commit | commitdiff | tree | snapshot |
2010-10-29 |
westcott | added cluster.classic command |
commit | commitdiff | tree | snapshot |
2010-10-29 |
westcott | added cluster.classic command |
commit | commitdiff | tree | snapshot |
2010-10-27 |
westcott | fixed helps |
commit | commitdiff | tree | snapshot |
2010-10-27 |
westcott | fixing helps |
commit | commitdiff | tree | snapshot |
2010-10-26 |
westcott | done testing 1.14.0 |
commit | commitdiff | tree | snapshot |
2010-10-26 |
westcott | done testing 1.14.0 |
commit | commitdiff | tree | snapshot |
2010-10-26 |
westcott | fixes while testing |
commit | commitdiff | tree | snapshot |
2010-10-25 |
westcott | added remove file option to pipeline command in user... |
commit | commitdiff | tree | snapshot |
2010-10-25 |
westcott | testing 1.14.0 |
commit | commitdiff | tree | snapshot |
2010-10-25 |
westcott | testing 1.14.0 |
commit | commitdiff | tree | snapshot |
2010-10-20 |
westcott | added pairwise.seqs |
commit | commitdiff | tree | snapshot |
2010-10-19 |
westcott | fixed bug with aligner and longest base. added deunique... |
commit | commitdiff | tree | snapshot |
2010-10-19 |
westcott | fixed phylo.diversity and made trim.seqs with allfiles... |
commit | commitdiff | tree | snapshot |
2010-10-18 |
westcott | fixed unifrac.weighted |
commit | commitdiff | tree | snapshot |
2010-10-18 |
westcott | fixed unifrac.unweighted |
commit | commitdiff | tree | snapshot |
2010-10-18 |
westcott | added ifdefs for extern c |
commit | commitdiff | tree | snapshot |
2010-10-18 |
westcott | testing metastats compile |
commit | commitdiff | tree | snapshot |
2010-10-15 |
westcott | added pipeline commands which involved change to comman... |
commit | commitdiff | tree | snapshot |
2010-10-05 |
westcott | paralellized phylo.diversity |
commit | commitdiff | tree | snapshot |
2010-10-04 |
westcott | paralellized rarefaction.single |
commit | commitdiff | tree | snapshot |
2010-10-04 |
westcott | changed name of parse.fastaq command to fastq.info |
commit | commitdiff | tree | snapshot |
2010-09-30 |
westcott | added parse.fastaq command, added permute option to... |
commit | commitdiff | tree | snapshot |
2010-09-28 |
westcott | added distance option to summary.shared |
commit | commitdiff | tree | snapshot |
2010-09-24 |
westcott | added get.lineage and remove.lineage commands |
commit | commitdiff | tree | snapshot |
2010-09-23 |
westcott | fixed order of unifrac commands so that it matches... |
commit | commitdiff | tree | snapshot |
2010-09-23 |
westcott | added cluster.fragments command as well as the nseqs... |
commit | commitdiff | tree | snapshot |
2010-09-21 |
westcott | added mothur executable to cvs |
commit | commitdiff | tree | snapshot |
2010-09-21 |
westcott | added split.groups command |
commit | commitdiff | tree | snapshot |
2010-09-20 |
westcott | changed how we name the make.group groups file, and... |
commit | commitdiff | tree | snapshot |
2010-09-17 |
westcott | bug fixes |
commit | commitdiff | tree | snapshot |
2010-09-17 |
westcott | bug fixes |
commit | commitdiff | tree | snapshot |
2010-09-17 |
westcott | working on megastats |
commit | commitdiff | tree | snapshot |
2010-09-16 |
westcott | initial add of metastats |
commit | commitdiff | tree | snapshot |
2010-09-15 |
westcott | added normalize.shared command |
commit | commitdiff | tree | snapshot |
2010-09-15 |
westcott | added normalize.shared command |
commit | commitdiff | tree | snapshot |
2010-09-15 |
westcott | paralellized summary.shared |
commit | commitdiff | tree | snapshot |
2010-09-09 |
westcott | done testing 1.13.0 |
commit | commitdiff | tree | snapshot |
2010-09-08 |
westcott | testing 1.13.0 |
commit | commitdiff | tree | snapshot |
2010-09-04 |
westcott | working on testing for 1.13 |
commit | commitdiff | tree | snapshot |
2010-09-03 |
westcott | working on testing |
commit | commitdiff | tree | snapshot |
2010-09-01 |
westcott | unifrac parallelization done, changed dist.seqs output... |
commit | commitdiff | tree | snapshot |
2010-09-01 |
westcott | working on unifrac parallelization |
commit | commitdiff | tree | snapshot |
2010-08-31 |
westcott | working on parallelizing unifrac.unweighted. |
commit | commitdiff | tree | snapshot |
2010-08-31 |
westcott | working on parallelizing unifrac.weighted. |
commit | commitdiff | tree | snapshot |
2010-08-30 |
westcott | sped up unifrac unweighted. |
commit | commitdiff | tree | snapshot |
2010-08-30 |
westcott | sped up unifrac weighted. |
commit | commitdiff | tree | snapshot |
2010-08-27 |
westcott | made read.tree not require a groupfile, if one is not... |
commit | commitdiff | tree | snapshot |
2010-08-27 |
westcott | fixed phylo.diversity |
commit | commitdiff | tree | snapshot |
2010-08-27 |
westcott | fixed phylo.diversity |
commit | commitdiff | tree | snapshot |
2010-08-26 |
pschloss | changes to read.tree |
commit | commitdiff | tree | snapshot |
2010-08-26 |
pschloss | modified splitAtComma in mothurout command |
commit | commitdiff | tree | snapshot |
2010-08-26 |
westcott | added clearcut source to mothur, fixed mislabeled share... |
commit | commitdiff | tree | snapshot |
2010-08-26 |
westcott | added clearcut source to mothur, fixed mislabeled share... |
commit | commitdiff | tree | snapshot |
2010-08-26 |
pschloss | changes to read.otu(list/shared) - took out substr... |
commit | commitdiff | tree | snapshot |
2010-08-26 |
pschloss | took out debugging output code from distance calculators |
commit | commitdiff | tree | snapshot |
2010-08-24 |
westcott | added sharedRabundFloatVector class to represent the... |
commit | commitdiff | tree | snapshot |
2010-08-24 |
westcott | moved utilities out of mothur.h and into mothurOut... |
commit | commitdiff | tree | snapshot |
2010-08-23 |
westcott | filter.seqs bug change |
commit | commitdiff | tree | snapshot |
2010-08-23 |
westcott | numSeqs passing fix |
commit | commitdiff | tree | snapshot |
2010-08-23 |
pschloss | added a few evenness calculators and fixed a couple... |
commit | commitdiff | tree | snapshot |
2010-08-20 |
pschloss | fixed filterseqscommand bug where trump wasn't being... |
commit | commitdiff | tree | snapshot |
2010-08-20 |
westcott | pre.cluster |
commit | commitdiff | tree | snapshot |
2010-08-20 |
westcott | pre.cluster |
commit | commitdiff | tree | snapshot |
2010-08-20 |
westcott | modified precluster to use less memory. |
commit | commitdiff | tree | snapshot |
2010-08-20 |
westcott | changed file divide for trim.seqs |
commit | commitdiff | tree | snapshot |
2010-08-19 |
westcott | changed how we break up the files on parallelized comma... |
commit | commitdiff | tree | snapshot |
2010-08-19 |
westcott | modified calculators to use doubles, added numotu and... |
commit | commitdiff | tree | snapshot |
next |