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added an example of calculating read depth
2009-06-13 Heng Liadded an example of calculating read depth
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2009-06-13 Heng Li * samtools-0.1.4-10 (r341)
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2009-06-13 Heng Li * samtools-0.1.4-9 (r340)
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2009-06-13 Heng Liupdate INSTALL
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2009-06-12 Heng Li * samtools-0.1.4-8 (r338)
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2009-06-12 Heng Li * samtools-0.1.4-7 (r337)
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2009-06-12 Heng Li * no changes to samtools itself
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2009-06-12 Heng Liremove zlib for simplification...
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2009-06-12 Heng Li * samtools-0.1.4-6 (r334)
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2009-06-12 Heng Liupdate ChangeLog
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2009-06-12 Heng Lifixed minor things in Makefile
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2009-06-12 Heng Li * samtools-0.1.4-5 (r3310
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2009-06-12 Heng Liupdate information...
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2009-06-12 Heng Li * updated novoalign converter by Colin Hercus et al.
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2009-06-12 Heng Li * update Makefile
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2009-06-12 Heng Li * added zlib-1.2.3 as razip requires that
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2009-06-12 Heng LiUnfinished
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2009-06-10 Heng Li * samtools-0.1.4-4 (r325)
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2009-06-10 Heng Li * samtools-0.1.4-3 (r324)
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2009-06-10 Heng Li * samtools.pl-0.3.2 (r322)
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2009-06-10 Heng Lifixed a typo
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2009-06-09 Heng Lijust typo. no real change
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2009-06-08 Heng Lia little bit code cleanup
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2009-06-08 Heng Li * samtools.pl-0.3.1
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2009-06-08 Heng Li * samtools.pl-0.3.0
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2009-06-08 Heng Li * samtools.pl-0.2.3
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2009-06-08 Heng Li * samtools-0.1.4-2 (r316)
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2009-06-04 Heng Li * samtools.pl-0.2.2
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2009-06-03 Heng Li * in snpFilter, suppress non-SNP sites
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2009-06-01 Heng Li * samtools.pl-0.2.1
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2009-06-01 Heng Li * samtools.pl-0.2.0
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2009-05-28 Heng Li * minor changes to bgzf: return NULL if fd == -1
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2009-05-28 Heng LiScript for paired-end pileup, contributed by Stephen...
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2009-05-28 Heng Li * samtools-0.1.4-1 (r304)
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2009-05-21 Heng LiRelease samtools-0.1.4
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2009-05-21 Heng Li * samtools-0.1.3-24 (r296)
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2009-05-21 Heng Li * samtools-0.1.3-23 (r295)
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2009-05-20 Heng Liadded a missing header file
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2009-05-19 Heng Li * samtools-0.1.3-22 (r293)
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2009-05-18 Heng LiAdded a note to the manual. Currently SAMtools used...
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2009-05-14 Heng Li * samtools-0.1.3-21 (286)
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2009-05-13 Heng Li * samtools-0.1.3-20 (r276)
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2009-05-12 Heng Li * samtools-0.1.3-19 (r275)
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2009-05-12 Heng Li * samtools-0.1.3-18 (r273)
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2009-05-12 Heng Lichange a parameter. It does nothing
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2009-05-12 Heng Li * samtools-0.1.3-17 (r271)
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2009-05-05 Heng Li * samtools-0.1.3-16 (r267)
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2009-05-05 Heng Li * samtools-0.1.3-15 (r266)
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2009-05-05 Heng Li * samtools-0.1.3-14 (r262)
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2009-05-05 Heng Li * samtools-0.1.3-13 (r260)
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2009-05-05 Heng Liupdate Makefile.am
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2009-05-05 Heng Li * samtools-0.1.3-12 (r259)
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2009-05-05 Heng Li * samtools-0.1.3-11 (r258)
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2009-05-05 Heng Li * samtools-0.1.3-10 (r257)
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2009-05-04 Heng Li * samtools-0.1.3-9 (r256)
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2009-04-28 Heng Li * samtools-0.1.3-8 (r251)
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2009-04-28 Heng Liadded missing files
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2009-04-28 Heng Liimprove large file support in compilation
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2009-04-28 Heng Liupdate INSTALL
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2009-04-28 Heng Lifixed various issues about the GNU building scripts
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2009-04-28 Heng Li * samtools-0.1.3-7 (r246)
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2009-04-25 Heng Li * samtools-0.1.3-6 (r244)
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2009-04-24 Heng Li * samtools-0.1.3-5 (r243)
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2009-04-24 Heng Li * samtools-0.1.3-4 (r242)
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2009-04-24 Heng Li * samtools-0.1.3-3 (r240)
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2009-04-24 Heng Li * samtools-0.1.3-2 (r239)
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2009-04-21 Heng Li * samtools-0.1.3-1
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2009-04-16 Heng Lia missing file in Makefile.lite
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2009-04-15 Heng LiRelease samtools-0.1.3
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2009-04-15 Heng Li * samtools-0.1.2-28
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2009-04-15 Heng Liprepare for release 0.1.3
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2009-04-15 Heng Liconvert NCBI-BLASTN to SAM
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2009-04-15 Heng Li * samtools-0.1.2-27
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2009-04-15 Heng Li * samtools-0.1.2-26
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2009-04-14 Heng Liproposed NEWS for the new release (have not yet)
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2009-04-14 Heng Li * samtools.pl-0.1.1
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2009-04-14 Heng Li * samtools-0.1.2-25
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2009-04-13 Heng Liupdate ChangeLog from "svn log"
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2009-04-12 Heng Li * samtools-0.1.2-24
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2009-04-12 Heng Li * samtools-0.1.2-23
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2009-04-12 Heng Li * samtools-0.1.2-22
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2009-04-08 Heng Li * fixed the problem in the example alignment due to...
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2009-04-08 Heng Li * samtools-0.1.2-21
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2009-04-08 Heng Limake the script robust to the bugs in SOAP-2.1.7
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2009-04-02 Heng Li * samtools-0.1.2-20
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2009-04-02 Heng Li * samtools-0.1.2-19
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2009-03-27 Heng Li * samtools-0.1.2-18
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2009-03-24 Heng Lirename Makefile.std as Makefile. GNU building systerm...
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2009-03-24 Heng Li * samtools-0.1.2-17
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2009-03-24 Heng Li * samtools-0.1.2-16
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2009-03-12 Heng Li * soap2sam.pl-0.1.2
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2009-03-11 Heng Liadded bam_stat.o to Makefile.lite
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2009-03-10 Heng Li * samtools-0.1.2-15
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2009-03-10 Heng Li * samtools-0.1.2-14
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2009-03-03 Heng Li * samtools-0.1.2-13
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2009-03-03 Heng Li * samtools-0.1.2-12
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2009-03-02 Heng Li * samtools-0.1.2-11
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2009-03-02 Heng Li * samtools-0.1.2-10
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2009-03-01 Heng Li * wgsim-0.2.3
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2009-02-26 Heng Li * wgsim-0.2.2
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