projects / samtools.git / tree
| -rw-r--r-- | 0 | AUTHORS | blob | history | raw |
| -rw-r--r-- | 1085 | COPYING | blob | history | raw |
| -rw-r--r-- | 42974 | ChangeLog | blob | history | raw |
| -rw-r--r-- | 58776 | ChangeLog.old | blob | history | raw |
| -rw-r--r-- | 454 | INSTALL | blob | history | raw |
| -rw-r--r-- | 592 | Makefile.am | blob | history | raw |
| -rw-r--r-- | 1742 | Makefile.generic | blob | history | raw |
| -rw-r--r-- | 1671 | Makefile.lite | blob | history | raw |
| -rw-r--r-- | 3842 | NEWS | blob | history | raw |
| -rw-r--r-- | 0 | README | blob | history | raw |
| -rw-r--r-- | 191 | autogen.sh | blob | history | raw |
| -rw-r--r-- | 8756 | bam.c | blob | history | raw |
| -rw-r--r-- | 23234 | bam.h | blob | history | raw |
| -rw-r--r-- | 5437 | bam_aux.c | blob | history | raw |
| -rw-r--r-- | 1064 | bam_endian.h | blob | history | raw |
| -rw-r--r-- | 12022 | bam_import.c | blob | history | raw |
| -rw-r--r-- | 13683 | bam_index.c | blob | history | raw |
| -rw-r--r-- | 5357 | bam_lpileup.c | blob | history | raw |
| -rw-r--r-- | 16371 | bam_maqcns.c | blob | history | raw |
| -rw-r--r-- | 1282 | bam_maqcns.h | blob | history | raw |
| -rw-r--r-- | 2540 | bam_mate.c | blob | history | raw |
| -rw-r--r-- | 2970 | bam_md.c | blob | history | raw |
| -rw-r--r-- | 6836 | bam_pileup.c | blob | history | raw |
| -rw-r--r-- | 11726 | bam_plcmd.c | blob | history | raw |
| -rw-r--r-- | 4239 | bam_rmdup.c | blob | history | raw |
| -rw-r--r-- | 6481 | bam_sort.c | blob | history | raw |
| -rw-r--r-- | 2620 | bam_stat.c | blob | history | raw |
| -rw-r--r-- | 10788 | bam_tview.c | blob | history | raw |
| -rw-r--r-- | 6649 | bamtk.c | blob | history | raw |
| -rw-r--r-- | 13023 | bgzf.c | blob | history | raw |
| -rw-r--r-- | 2723 | bgzf.h | blob | history | raw |
| -rw-r--r-- | 5019 | bgzip.c | blob | history | raw |
| -rw-r--r-- | 214 | cleanup.sh | blob | history | raw |
| -rw-r--r-- | 906 | configure.ac | blob | history | raw |
| drwxr-xr-x | - | examples | tree | history |
| -rw-r--r-- | 6760 | faidx.c | blob | history | raw |
| -rw-r--r-- | 2389 | faidx.h | blob | history | raw |
| -rw-r--r-- | 5911 | glf.c | blob | history | raw |
| -rw-r--r-- | 1799 | glf.h | blob | history | raw |
| -rw-r--r-- | 16522 | khash.h | blob | history | raw |
| -rw-r--r-- | 8030 | kseq.h | blob | history | raw |
| -rw-r--r-- | 9672 | ksort.h | blob | history | raw |
| -rw-r--r-- | 2035 | kstring.c | blob | history | raw |
| -rw-r--r-- | 1058 | kstring.h | blob | history | raw |
| drwxr-xr-x | - | misc | tree | history |
| -rw-r--r-- | 19770 | razf.c | blob | history | raw |
| -rw-r--r-- | 3866 | razf.h | blob | history | raw |
| -rw-r--r-- | 4058 | razip.c | blob | history | raw |
| -rw-r--r-- | 9387 | samtools.1 | blob | history | raw |
| -rw-r--r-- | 752 | source.dot | blob | history | raw |
| -rw-r--r-- | 6859 | zutil.h | blob | history | raw |