+------------------------------------------------------------------------
+r221 | lh3lh3 | 2009-04-15 13:32:14 +0100 (Wed, 15 Apr 2009) | 2 lines
+Changed paths:
+ A /trunk/samtools/misc/blast2sam.pl
+
+convert NCBI-BLASTN to SAM
+
+------------------------------------------------------------------------
+r220 | lh3lh3 | 2009-04-15 13:18:19 +0100 (Wed, 15 Apr 2009) | 3 lines
+Changed paths:
+ M /trunk/samtools/bam_lpileup.c
+ M /trunk/samtools/bamtk.c
+
+ * samtools-0.1.2-27
+ * fixed a small memory leak in tview
+
+------------------------------------------------------------------------
+r219 | lh3lh3 | 2009-04-15 13:00:08 +0100 (Wed, 15 Apr 2009) | 3 lines
+Changed paths:
+ M /trunk/samtools/bam_rmdup.c
+ M /trunk/samtools/bamtk.c
+
+ * samtools-0.1.2-26
+ * fixed a bug in rmdup when there are unmapped reads
+
+------------------------------------------------------------------------
+r218 | lh3lh3 | 2009-04-14 22:28:58 +0100 (Tue, 14 Apr 2009) | 2 lines
+Changed paths:
+ M /trunk/samtools/ChangeLog
+ M /trunk/samtools/NEWS
+
+proposed NEWS for the new release (have not yet)
+
------------------------------------------------------------------------
r216 | lh3lh3 | 2009-04-14 22:10:46 +0100 (Tue, 14 Apr 2009) | 4 lines
Changed paths:
-Beta Release 0.1.3 (XX April, 2009)
+Beta Release 0.1.3 (15 April, 2009)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Notable changes in SAMtools:
* Various converters: improved functionality in general.
-(0.1.3: XX April 2009, rXXX)
+(0.1.3: 15 April 2009, rXXX)
-.TH samtools 1 "28 January 2009" "samtools-0.1.2" "Bioinformatics tools"
+.TH samtools 1 "15 April 2009" "samtools-0.1.3" "Bioinformatics tools"
.SH NAME
.PP
samtools - Utilities for the Sequence Alignment/Map (SAM) format
.SH LIMITATIONS
.PP
.IP o 2
-In general, more testing is needed to ensure there is no severe bug.
-.IP o 2
Reference sequence names and lengths are not acquired from the BAM/SAM header.
.IP o 2
CIGAR operation P is not properly handled at the moment.
.IP o 2
-There is a small memory leak in the viewer.
+The text viewer mysteriously crashes in a very rare case.
.SH AUTHOR
.PP