]> git.donarmstrong.com Git - samtools.git/history - bamtk.c
Should update POS on unmapped reads in 'samtools depad'
[samtools.git] / bamtk.c
2012-05-18 Petr DanecekMerge branch 'master' of github.com:samtools/samtools
2012-05-17 Heng Liadded bamshuf from htslib
2012-04-23 Petr DanecekResolved merge conflict
2012-04-17 Heng Lir572: added "bedcov" command
2012-02-08 Heng Lichanges from git
2011-09-23 Heng Liconverted padded SAM to unpadded SAM
2011-07-07 Heng LiRelease samtools-0.1.17
2011-04-22 Heng LiRemoved the pileup command
2011-04-18 Heng LiAdded the support for the new SAM/BAM type "B"
2011-04-01 Heng LiAdded an example of using mpileup
2011-03-18 Heng Li * allow to change the compression level in BAM output
2011-02-28 Heng Li * put version number in bam.h
2011-02-25 Heng Li * change the order of PL/GL according to the latest...
2011-02-25 Heng Liadded the phase command
2011-01-06 Heng Li * samtools-0.1.12-10 (r896)
2010-12-21 Heng Li * samtools-0.1.12-9 (r891)
2010-12-15 Heng Li * samtools-0.1.12-12 (r889)
2010-12-15 Heng LiWhen -B is applied to mpileup, still use paired reads...
2010-12-15 Heng Li * samtools-0.1.12-6 (r887)
2010-12-14 Heng Li(Arguably) improved the indel caller a tiny bit for...
2010-12-13 Heng Li * samtools-0.1.12-4 (r884)
2010-12-10 Heng LiMake sure that the GT genotype field is the first
2010-12-08 Heng Li * samtools-0.1.12-2 (r877)
2010-12-08 Heng Li * samtools-0.1.12-1 (r873)
2010-12-05 Heng Liadded a warning for the Windows version
2010-12-02 Heng LiRelease samtools-0.1.12a
2010-12-02 Heng LiRelease samtools-0.1.12
2010-12-02 Heng Li * samtools-0.1.11-1 (r858)
2010-11-22 Heng Liforget to change the version information
2010-11-20 Heng Li * samtools-0.1.10-9 (r844)
2010-11-19 Heng Li * samtools-0.1.10 (r841)
2010-11-19 Heng Li * samtools-0.1.10-4 (r840)
2010-11-18 Heng Li * samtools-0.1.10-6 (r839)
2010-11-18 Heng Li * samtools-r836
2010-11-18 Heng Li * samtools-0.1.10-4 (r834)
2010-11-18 Heng Lifixed a bug in printing MNPs
2010-11-18 Heng Liminor change to how seqQ is applied
2010-11-18 Heng Li * samtools-0.1.10 (r831)
2010-11-17 Heng LiRelease samtools-0.1.10 (r829)
2010-11-17 Heng Liupdate version information: samtools-0.1.9-20 (r828)
2010-11-16 Heng Li * samtools-0.1.9-18 (r825)
2010-11-16 Heng Li * samtools-0.1.9-17 (r824)
2010-11-15 Heng Li * samtools-0.1.9-r823
2010-11-15 Heng Li * samtools-0.1.9-16 (r822)
2010-11-13 Heng Li * samtools-0.1.9-15 (r821)
2010-11-13 Heng Li * samtools-0.1.9-14 (r820)
2010-11-13 Heng Li * samtools-0.1.9-13 (r819)
2010-11-12 Heng Li * samtools-r818
2010-11-12 Heng Li * samtools-0.1.19-11 (r817)
2010-11-11 Heng Li * samtools-0.1.9-10 (r816)
2010-11-11 Heng Li * samtools-0.1.9-9 (r810)
2010-11-10 Heng Li * samtools-0.1.9-8 (r809)
2010-11-10 Heng Li * samtools-0.1.9-8 (r807)
2010-11-09 Heng Li * samtools-0.1.9-7 (r804)
2010-11-09 Heng Li * samtools-0.1.9-6 (r803)
2010-11-09 Heng Li * samtools-0.1.9-5 (r802)
2010-11-09 Heng Li * samtools-0.1.9-4 (r801)
2010-11-08 Heng Li * samtools-0.1.9-2 (r797)
2010-10-30 Heng Li * samtools-0.1.9-2 (r787)
2010-10-29 Heng Li * samtools-0.1.9-1 (r786)
2010-10-28 Heng LiRelease samtools-0.1.9 (r783)
2010-10-27 Heng Li * samtools-0.1.8-22 (r781)
2010-10-27 Heng Li * samtools-0.1.8-21 (r780)
2010-10-27 Heng Li * samtools-0.1.8-20 (r778)
2010-10-26 Heng Li * samtools-0.1.8-19 (r777)
2010-10-03 Heng Li * samtools-0.1.8-18 (r763)
2010-10-01 Heng Li * samtools-0.1.8-17 (r760)
2010-09-30 Heng Limark samtools-0.1.8-16 (r759)
2010-09-22 Heng Li * samtools-0.1.8-15 (r379)
2010-09-16 Heng Li * samtools-0.1.8-14 (r727)
2010-09-08 Heng Li * samtools-0.1.8-13 (r715)
2010-08-24 Heng Li * samtools-0.1.8-13 (r698)
2010-08-23 Heng Li * samtools-0.1.8-12 (r692)
2010-08-06 Heng Li * samtools-0.1.8-11 (r672)
2010-08-03 Heng Li * samtools-0.1.8-10 (r658)
2010-08-02 Heng Li * samtools-0.1.8-9 (r649)
2010-07-28 Heng Li * samtools-0.1.8-8 (r644)
2010-07-26 Heng Li * samtools-0.1.8-7 (r639)
2010-07-25 Heng Li * samtools-0.1.8-6 (r638)
2010-07-24 Heng Liminor tweaks
2010-07-23 Heng Liadded an alternative prior
2010-07-23 Heng Li * samtools-0.1.8-3 (r627)
2010-07-14 Heng Li * samtools-0.1.8-2 (r617)
2010-07-13 Heng Li * samtools-0.1.8-1 (r615)
2010-07-12 Heng LiRelease samtools-0.1.8
2010-07-08 Heng Li * samtools-0.1.7-r607
2010-07-08 Heng Li * samtools-.1.7-18 (r605)
2010-06-14 Heng Liminor fix. No actual effect.
2010-06-13 Heng Li * samtools-0.1.7-17 (r596)
2010-06-13 Heng Li * samtools-0.1.7-16 (r595)
2010-06-12 Heng Li * samtools-0.1.7-15 (r592)
2010-06-12 Heng Li * samtools-0.1.7-14 (r591)
2010-06-12 Heng Li * samtools-0.1.7-13 (r590)
2010-06-12 Heng Li * samtools-0.1.7-12 (r589)
2010-06-11 Heng Li * samtools-0.1.7-11 (r588)
2010-06-11 Heng Li * samtools-0.1.7-10 (r587)
2010-06-11 Heng Li * samtools-0.1.7-9 (r586)
2010-06-11 Heng Li * samtools-0.1.7-8 (r585)
2010-06-11 Heng Li * samtools-0.1.7-7 (r584)
2010-02-01 Heng Li * samtools-0.1.7-6
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