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2013-04-29	SarahsWork	added square format for phylipfile. made command work...	commit \| commitdiff \| tree
2013-04-29	SarahsWork	added shared, constaxonomy and label parameter to get...	commit \| commitdiff \| tree
2013-04-26	SarahsWork	added adjustDots function to pcr.seqs, keeps sequences...	commit \| commitdiff \| tree
2013-04-22	SarahsWork	paralellized make.table / count.seqs command. added...	commit \| commitdiff \| tree
2013-04-22	SarahsWork	added flag to count table read so that commands that...	commit \| commitdiff \| tree
2013-04-19	SarahsWork	added mothurOutJustToScreen function and changed all...	commit \| commitdiff \| tree
2013-04-19	SarahsWork	paralellized unifrac.weighted for windows. added get...	commit \| commitdiff \| tree
2013-04-12	SarahsWork	added get.metacommunity command.	commit \| commitdiff \| tree
2013-04-08	SarahsWork	added rarepercent and keepties parameters to the filter...	commit \| commitdiff \| tree
2013-04-05	SarahsWork	added method parameter to get.oturep. options method...	commit \| commitdiff \| tree
2013-04-05	SarahsWork	sffinfo bug with flow grams right index when clipQualRight=0	commit \| commitdiff \| tree
2013-04-03	SarahsWork	added name, group and count files to chop.seqs. added...	commit \| commitdiff \| tree
2013-04-03	SarahsWork	added count file to get.sabund and get.rabund commands...	commit \| commitdiff \| tree
2013-04-01	SarahsWork	added end of file character to some type type reads...	commit \| commitdiff \| tree
2013-03-25	SarahsWork	removed make count from make.contigs	commit \| commitdiff \| tree
2013-03-22	SarahsWork	make.contigs bug with file option and multiple processors...	commit \| commitdiff \| tree
2013-03-19	SarahsWork	finished dereplicate changes to chimera commands. ...	commit \| commitdiff \| tree
2013-03-18	SarahsWork	Merge remote-tracking branch 'origin'	commit \| commitdiff \| tree
2013-03-18	SarahsWork	working on dereplicate=t issue in chimera.slayer and...	commit \| commitdiff \| tree
2013-03-08	SarahsWork	finished up adding N code to trim.flows	commit \| commitdiff \| tree
2013-03-08	SarahsWork	added N for trimOligos change	commit \| commitdiff \| tree
2013-03-08	SarahsWork	added N code to flow data. removed changed for trimming...	commit \| commitdiff \| tree
2013-03-06	SarahsWork	added pacbio parameter to fastq.info. fixed issue with...	commit \| commitdiff \| tree
2013-03-06	SarahsWork	<= change for anova and homova. finished chimera.uchime...	commit \| commitdiff \| tree
2013-03-05	SarahsWork	Merge remote-tracking branch 'origin'	commit \| commitdiff \| tree
2013-03-05	SarahsWork	working on chimera.uchime change for dereplicate=t...	commit \| commitdiff \| tree
2013-02-27	SarahsWork	mods to resolve some misc warnings. added alignPrimer...	commit \| commitdiff \| tree
2013-02-19	SarahsWork	working on topdown in pre.cluster	commit \| commitdiff \| tree
2013-02-18	SarahsWork	linux screen.seqs segfault	commit \| commitdiff \| tree
2013-02-15	SarahsWork	test	commit \| commitdiff \| tree
2013-02-15	SarahsWork	Removed file that shouldn't be tracked	commit \| commitdiff \| tree
2013-02-15	SarahsWork	test	commit \| commitdiff \| tree
2013-02-15	SarahsWork	test commit	commit \| commitdiff \| tree
2012-01-27	westcott	added sequence name to error string in fastq.info....	commit \| commitdiff \| tree
2012-01-25	westcott	added otu.association command. added calcSpearman,...	commit \| commitdiff \| tree

Mothur--16S microbiota sequencing software; mirror of main repository with my branches

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