git.donarmstrong.com Git - mothur.git/commit

]> git.donarmstrong.com Git - mothur.git/commit

author	SarahsWork <sarahswork@imac.westcotts.net>
	Wed, 27 Feb 2013 20:08:18 +0000 (15:08 -0500)
committer	SarahsWork <sarahswork@imac.westcotts.net>
	Wed, 27 Feb 2013 20:08:18 +0000 (15:08 -0500)
commit	8d341208b0cd0c7a4ff8b77c6b164e06f2f39610
tree	795d0558e4c2434ad61e57c9a04cc52f962af682	tree \| snapshot
parent	e0c50fc42e953dbe258feb9bc1d1d7dc10fafff0	commit \| diff

mods to resolve some misc warnings. added alignPrimer function to needle man to allow for degenerated bases. added trimming of paired barcodes and primers to trim.seqs

19 files changed:

abstractrandomforest.cpp		diff \| blob \| history
alignment.hpp		diff \| blob \| history
alignmentdb.cpp		diff \| blob \| history
cluster.hpp		diff \| blob \| history
consensusseqscommand.cpp		diff \| blob \| history
kmertree.cpp		diff \| blob \| history
kruskalwalliscommand.cpp		diff \| blob \| history
libshuff.h		diff \| blob \| history
mothurout.cpp		diff \| blob \| history
needlemanoverlap.cpp		diff \| blob \| history
needlemanoverlap.hpp		diff \| blob \| history
preclustercommand.h		diff \| blob \| history
regularizedrandomforest.cpp		diff \| blob \| history
shhhercommand.cpp		diff \| blob \| history
trialSwap2.cpp		diff \| blob \| history
trimoligos.cpp		diff \| blob \| history
trimoligos.h		diff \| blob \| history
trimseqscommand.cpp		diff \| blob \| history
trimseqscommand.h		diff \| blob \| history

Mothur--16S microbiota sequencing software; mirror of main repository with my branches

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