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[mothur.git] / unifracweightedcommand.cpp

2011-01-07	westcott	working on chimera change to add trim feature, fixed...	blob \| commitdiff \| raw
2011-01-05	westcott	removed various build warnings	blob \| commitdiff \| raw \| diff to current
2010-11-12	westcott	added get.otus and remove.otus commands	blob \| commitdiff \| raw \| diff to current
2010-11-05	westcott	cluster.split fix	blob \| commitdiff \| raw \| diff to current
2010-10-26	westcott	fixes while testing	blob \| commitdiff \| raw \| diff to current
2010-10-18	westcott	fixed unifrac.weighted	blob \| commitdiff \| raw \| diff to current
2010-10-15	westcott	added pipeline commands which involved change to comman...	blob \| commitdiff \| raw \| diff to current
2010-10-04	westcott	paralellized rarefaction.single	blob \| commitdiff \| raw \| diff to current
2010-09-23	westcott	fixed order of unifrac commands so that it matches...	blob \| commitdiff \| raw \| diff to current
2010-09-01	westcott	unifrac parallelization done, changed dist.seqs output...	blob \| commitdiff \| raw \| diff to current
2010-09-01	westcott	working on unifrac parallelization	blob \| commitdiff \| raw \| diff to current
2010-08-31	westcott	working on parallelizing unifrac.unweighted.	blob \| commitdiff \| raw \| diff to current
2010-08-31	westcott	working on parallelizing unifrac.weighted.	blob \| commitdiff \| raw \| diff to current
2010-08-30	westcott	sped up unifrac unweighted.	blob \| commitdiff \| raw \| diff to current
2010-08-30	westcott	sped up unifrac weighted.	blob \| commitdiff \| raw \| diff to current
2010-08-24	westcott	moved utilities out of mothur.h and into mothurOut...	blob \| commitdiff \| raw \| diff to current
2010-04-16	westcott	1.9	blob \| commitdiff \| raw \| diff to current
2010-03-03	westcott	added checks for ^C to quit command instead of program	blob \| commitdiff \| raw \| diff to current
2010-02-26	westcott	created mothurOut class to handle logfiles	blob \| commitdiff \| raw \| diff to current
2010-01-26	westcott	added set.dir command and modified commands to redirect...	blob \| commitdiff \| raw \| diff to current
2010-01-12	westcott	worked on hcluster. made .single command run using...	blob \| commitdiff \| raw \| diff to current
2010-01-05	westcott	you can now use a distance matrix as input for the...	blob \| commitdiff \| raw \| diff to current
2009-06-25	westcott	added logfile feature	blob \| commitdiff \| raw \| diff to current
2009-06-14	pschloss	merged pat's trim seqs edits with sarah's major overhau...	blob \| commitdiff \| raw \| diff to current
2009-06-12	westcott	broke up globaldata and moved error checking and help...	blob \| commitdiff \| raw \| diff to current
2009-04-17	westcott	added bootstrap.shared command and fixed some bugs...	blob \| commitdiff \| raw \| diff to current
2009-04-14	westcott	started shared utilities, updates to venn and heatmap...	blob \| commitdiff \| raw \| diff to current
2009-04-08	westcott	fixed bug in read.tree updates help and validparameters...	blob \| commitdiff \| raw \| diff to current
2009-04-06	westcott	fixed memory leak in parsimony calculator and added...	blob \| commitdiff \| raw \| diff to current
2009-03-16	westcott	added nseqs and sharednseqs calculators, removed excess...	blob \| commitdiff \| raw \| diff to current
2009-03-09	westcott	fixed bug in read.tree	blob \| commitdiff \| raw \| diff to current
2009-03-09	westcott	fixed valid parameters to include shared parameter...	blob \| commitdiff \| raw \| diff to current
2009-03-07	pschloss	mucked around some with the output in the unifrac.weigh...	blob \| commitdiff \| raw \| diff to current
2009-03-06	westcott	changed format of output in unifrac and parsimony files	blob \| commitdiff \| raw \| diff to current
2009-03-04	westcott	unifrac.weighted	blob \| commitdiff \| raw \| diff to current
2009-02-27	westcott	fixed parsimony with groups and worked on unifrac.unwei...	blob \| commitdiff \| raw \| diff to current
2009-02-26	westcott	parsimony with groups	blob \| commitdiff \| raw \| diff to current
2009-02-26	pschloss	fix weighted unifrac bug in findIndex and randomize...	blob \| commitdiff \| raw \| diff to current
2009-02-26	westcott	weightedcommand	blob \| commitdiff \| raw \| diff to current
2009-02-24	westcott	changed unifrac.weighted()	blob \| commitdiff \| raw \| diff to current
2009-02-18	westcott	parsimony command now uses groups, fixed bug with unwei...	blob \| commitdiff \| raw \| diff to current
2009-02-18	westcott	changed unweighted and weighted score cumulatives to...	blob \| commitdiff \| raw \| diff to current
2009-02-18	pschloss	fixed bug in read.tree	blob \| commitdiff \| raw \| diff to current
2009-02-11	westcott	added errorchecking and help info on new unifrac and...	blob \| commitdiff \| raw \| diff to current
2009-02-11	westcott	adding treeclimber and unifrac pieces	blob \| commitdiff \| raw \| diff to current

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