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]> git.donarmstrong.com Git - mothur.git/history - helpcommand.cpp

2009-06-25	westcott	added logfile feature	blob \| commitdiff \| raw
2009-06-15	westcott	removed validcommands and put its checking in commandfa...	blob \| commitdiff \| raw \| diff to current
2009-06-14	pschloss	merged pat's trim seqs edits with sarah's major overhau...	blob \| commitdiff \| raw \| diff to current
2009-06-12	westcott	broke up globaldata and moved error checking and help...	blob \| commitdiff \| raw \| diff to current
2009-06-08	westcott	added help for heatmap.sim	blob \| commitdiff \| raw \| diff to current
2009-06-08	westcott	added heatmap.sim command and changed heatmap to heatma...	blob \| commitdiff \| raw \| diff to current
2009-06-04	westcott	fixed some bugs	blob \| commitdiff \| raw \| diff to current
2009-05-27	westcott	fixed multiple bugs for 1.4 release	blob \| commitdiff \| raw \| diff to current
2009-05-24	pschloss	This contains Pat's bug fixes and updates. It represen...	blob \| commitdiff \| raw \| diff to current
2009-05-22	westcott	changed defaults in allign.seqs command	blob \| commitdiff \| raw \| diff to current
2009-05-21	westcott	modified bin.seqs and get.oturep commands to include...	blob \| commitdiff \| raw \| diff to current
2009-05-21	westcott	added dist.shared command	blob \| commitdiff \| raw \| diff to current
2009-05-20	westcott	added get.repseqs command, started matrix output command	blob \| commitdiff \| raw \| diff to current
2009-05-18	westcott	added help for alignment code and thomas' calcs to...	blob \| commitdiff \| raw \| diff to current
2009-05-14	westcott	fixed bug in venn command	blob \| commitdiff \| raw \| diff to current
2009-05-13	westcott	changed name of distance command to dist.seqs	blob \| commitdiff \| raw \| diff to current
2009-05-13	westcott	fixed bug with getting sharedrabunds for venn, heatmap...	blob \| commitdiff \| raw \| diff to current
2009-05-04	westcott	added concensus command and updated calcs	blob \| commitdiff \| raw \| diff to current
2009-04-23	pschloss	more calculator edits and added coverage and whittaker	blob \| commitdiff \| raw \| diff to current
2009-04-17	westcott	added bootstrap.shared command and fixed some bugs...	blob \| commitdiff \| raw \| diff to current
2009-04-14	westcott	removed "shared" from some of the calculator names...	blob \| commitdiff \| raw \| diff to current
2009-04-14	westcott	added log10 and log2 scalers for heatmap	blob \| commitdiff \| raw \| diff to current
2009-04-14	westcott	started shared utilities, updates to venn and heatmap...	blob \| commitdiff \| raw \| diff to current
2009-04-08	westcott	fixed bug in read.tree updates help and validparameters...	blob \| commitdiff \| raw \| diff to current
2009-04-06	westcott	added get.oturep command	blob \| commitdiff \| raw \| diff to current
2009-04-06	westcott	fixed memory leak in parsimony calculator and added...	blob \| commitdiff \| raw \| diff to current
2009-04-03	westcott	venn command with up to 4 groups using sharedsobs,...	blob \| commitdiff \| raw \| diff to current
2009-03-31	westcott	started venn command	blob \| commitdiff \| raw \| diff to current
2009-03-30	westcott	added sort to heatmap to put shared otus at the top...	blob \| commitdiff \| raw \| diff to current
2009-03-19	westcott	updated errorchecking so it checks if the parameter...	blob \| commitdiff \| raw \| diff to current
2009-03-19	westcott	libshuff and updated help to include libshuff and modif...	blob \| commitdiff \| raw \| diff to current
2009-03-09	westcott	deleted read.shared command and added its functionality...	blob \| commitdiff \| raw \| diff to current
2009-03-09	westcott	fixed valid parameters to include shared parameter...	blob \| commitdiff \| raw \| diff to current
2009-02-18	ryabin	Added get.line command.	blob \| commitdiff \| raw \| diff to current
2009-02-18	westcott	parsimony command now uses groups, fixed bug with unwei...	blob \| commitdiff \| raw \| diff to current
2009-02-18	westcott	minor bugs fixes and added line and label options to...	blob \| commitdiff \| raw \| diff to current
2009-02-13	westcott	added read.shared, broke up globaldata a bit	blob \| commitdiff \| raw \| diff to current
2009-02-11	westcott	added errorchecking and help info on new unifrac and...	blob \| commitdiff \| raw \| diff to current
2009-01-28	westcott	updated help	blob \| commitdiff \| raw \| diff to current
2009-01-28	pschloss	I've changed the listfile, sabundfile, etc. option...	blob \| commitdiff \| raw \| diff to current
2009-01-21	westcott	deconvolute command	blob \| commitdiff \| raw \| diff to current
2009-01-20	westcott	changed read.shared to read.list and incorporated the...	blob \| commitdiff \| raw \| diff to current
2009-01-16	westcott	Initial revision	blob \| commitdiff \| raw \| diff to current

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