| 2011-06-28 |
westcott | indicator command |
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| 2011-06-17 |
westcott | 1.20.0 |
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| 2011-06-01 |
westcott | added count.seqs command and made some modifcations... |
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| 2011-05-27 |
westcott | added deunique.tree command |
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| 2011-05-16 |
westcott | added chimera.uchime |
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| 2011-05-11 |
westcott | working on citations |
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| 2011-05-09 |
westcott | 1.19.0 |
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| 2011-05-06 |
westcott | fixed template=self thing |
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| 2011-05-04 |
westcott | chimera.slayer |
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| 2011-04-25 |
westcott | fixed ties issue in maligner getBlastSeqs |
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| 2011-04-20 |
pschloss | some alterations to chimera.slayer |
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| 2011-04-18 |
westcott | modified chimera.slayer template=self |
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| 2011-04-15 |
westcott | 1.18.1 |
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| 2011-04-11 |
westcott | 1.18.0 - fixed make.shared abort issue |
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| 2011-04-08 |
westcott | fixing bugs while testing |
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| 2011-04-07 |
westcott | fixed bug with tree reading |
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| 2011-04-06 |
westcott | added getCommandInfoCommand for gui |
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| 2011-04-06 |
westcott | removed read.dist, read.otu, read.tree and globaldata... |
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| 2011-03-16 |
westcott | added set.current and get.current commands and modified... |
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| 2011-03-15 |
westcott | adding current file class |
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| 2011-03-11 |
westcott | added namefile to summary.seqs |
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| 2011-03-07 |
pschloss | fix trim.seqs / qualscores bug |
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| 2011-03-04 |
westcott | bug fixes |
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| 2011-03-03 |
pschloss | modified seqerror and qualscores |
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| 2011-02-28 |
westcott | fixed unweighted command |
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| 2011-02-26 |
pschloss | some minor changes |
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| 2011-02-25 |
westcott | changed version and release date |
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| 2011-02-23 |
westcott | fixed bug in unifrac commands with unrooted trees |
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| 2011-02-21 |
pschloss | reworked amova / homova / anosim |
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| 2011-02-18 |
westcott | fixed unifrac bug with multiple processors if numComps... |
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| 2011-02-15 |
pschloss | fixed an mpi bug in shhh.seqs |
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| 2011-02-15 |
westcott | working on anosim command |
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| 2011-02-15 |
pschloss | fixed bugg in shhh.seqs command |
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| 2011-02-15 |
westcott | fixed mpi version compile issue with chimera.slayer |
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| 2011-02-15 |
pschloss | mods to seq.errror |
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| 2011-02-14 |
westcott | added make.fastq command |
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| 2011-02-14 |
westcott | fixed catchall PATH variable bug added trimera to chime... |
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| 2011-02-09 |
pschloss | mods to trim.seqs |
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| 2011-02-09 |
westcott | added mantel command |
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| 2011-02-08 |
pschloss | changes to trim.flows command |
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| 2011-02-08 |
westcott | added homova command |
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| 2011-02-08 |
westcott | added amova command |
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| 2011-02-07 |
westcott | adding license |
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| 2011-02-04 |
westcott | working on kendall |
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| 2011-02-04 |
pschloss | removed trimera checking from refchimeratest |
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| 2011-02-03 |
westcott | changes for 1.16.0 |
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| 2011-02-03 |
pschloss | *** empty log message *** |
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| 2011-01-26 |
westcott | mods in testing 1.16.0 |
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| 2011-01-24 |
westcott | added merge.groups command |
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| 2011-01-24 |
westcott | remove.rare command |
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| 2011-01-21 |
westcott | modified shhhercommand to make buildable with windows |
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| 2011-01-21 |
westcott | added calcs to tree.shared. working on remove.rare... |
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| 2011-01-14 |
westcott | fixed trim.seqs bug with qtrim parameter and added... |
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| 2011-01-10 |
westcott | pca command |
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| 2011-01-07 |
westcott | finished chimera.slayer adding trim parameter, added... |
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| 2011-01-05 |
westcott | changed filename of pcacommand to pcoacommand |
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| 2011-01-04 |
westcott | Changed back to xcode build. |
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| 2011-01-04 |
westcott | Changed back to xcode build. |
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| 2011-01-04 |
westcott | Changed back to xcode build. |
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| 2011-01-04 |
westcott | removed parse.sff command and made its functionality... |
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| 2010-12-31 |
pschloss | added shhh.seqs command |
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| 2010-12-23 |
pschloss | addition of trim.flows |
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| 2010-12-22 |
westcott | chimera.slayer fix |
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| 2010-12-20 |
pschloss | pat's changes to seq.error command |
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| 2010-12-17 |
westcott | added odum, canberra, structchi2, structchord, structe... |
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| 2010-12-17 |
westcott | fixed bug with trim.seqs- when a file is blank for... |
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| 2010-11-29 |
westcott | added consensus.seqs command |
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| 2010-11-19 |
westcott | added indicator command |
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| 2010-11-12 |
westcott | added get.otus and remove.otus commands |
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| 2010-11-10 |
westcott | added get.groups and remove.groups commands |
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| 2010-11-08 |
westcott | cluster.split fix |
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| 2010-11-05 |
westcott | fixed metastats, added resize to cluster.classic, added... |
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| 2010-11-05 |
westcott | cluster.split fix |
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| 2010-10-29 |
westcott | added cluster.classic command |
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| 2010-10-27 |
westcott | fixing helps |
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| 2010-10-26 |
westcott | done testing 1.14.0 |
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| 2010-10-25 |
westcott | added remove file option to pipeline command in user... |
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| 2010-10-20 |
westcott | added pairwise.seqs |
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| 2010-10-19 |
westcott | fixed bug with aligner and longest base. added deunique... |
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| 2010-10-15 |
westcott | added pipeline commands which involved change to comman... |
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| 2010-09-30 |
westcott | added parse.fastaq command, added permute option to... |
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| 2010-09-24 |
westcott | added get.lineage and remove.lineage commands |
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| 2010-09-23 |
westcott | added cluster.fragments command as well as the nseqs... |
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| 2010-09-21 |
westcott | added mothur executable to cvs |
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| 2010-09-21 |
westcott | added split.groups command |
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| 2010-09-17 |
westcott | bug fixes |
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| 2010-09-17 |
westcott | working on megastats |
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| 2010-09-16 |
westcott | initial add of metastats |
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| 2010-09-15 |
westcott | added normalize.shared command |
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| 2010-08-26 |
westcott | added clearcut source to mothur, fixed mislabeled share... |
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| 2010-08-26 |
westcott | added clearcut source to mothur, fixed mislabeled share... |
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| 2010-08-23 |
westcott | filter.seqs bug change |
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| 2010-08-23 |
westcott | numSeqs passing fix |
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| 2010-08-23 |
pschloss | added a few evenness calculators and fixed a couple... |
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| 2010-08-20 |
westcott | modified precluster to use less memory. |
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| 2010-08-19 |
westcott | modified calculators to use doubles, added numotu and... |
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| 2010-07-22 |
westcott | fixes while testing 1.12.0 |
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| 2010-07-19 |
westcott | added ordergroup parameter to read.otu |
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| 2010-07-19 |
pschloss | pat's updates on 7/19/10 |
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| 2010-07-14 |
pschloss | pat's changes to trim.seqs |
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