templates/article_shell.tex

   1 \documentclass[english,12pt]{article}
   2 \usepackage{fontspec}
   3 \setmainfont{FreeSerif}
   4 \setsansfont{FreeSans}
   5 \setmonofont{FreeMono}
   6 \usepackage{fancyhdr}
   7 \usepackage{graphicx}
   8 \usepackage[bf]{caption}
   9 \usepackage{rotating}
  10 \usepackage{multirow}
  11 \usepackage{setspace}
  12 \usepackage{txfonts}
  13 %\usepackage{fancyref}
  14 \usepackage{acronym}
  15 \usepackage{array}
  16 \usepackage{dcolumn}
  17 \usepackage{booktabs}
  18 \usepackage{adjustbox}
  19 \usepackage{longtable}
  20 \usepackage{geometry}
  21 \usepackage{pdflscape}
  22 \usepackage[backend=biber,natbib=true,hyperref=true,style=numeric-comp]{biblatex}
  23 %\usepackage[noblocks]{authblk}
  24 \usepackage[hyperfigures,backref,bookmarks,colorlinks]{hyperref}
  25 %\usepackage[hyperfigures,bookmarks,colorlinks,citecolor=black,filecolor=black,linkcolor=black,urlcolor=black]{hyperref}
  26 \usepackage[nomargin,inline,draft]{fixme}
  27 \usepackage[x11names,svgnames]{xcolor}
  28 \usepackage{texshade}
  29 \usepackage{tikz}
  30 \usepackage{nameref}
  31 \usepackage{zref-xr,zref-user}
  32 \newenvironment{narrow}[2]{%
  33   \begin{list}{}{%
  34       \setlength{\topsep}{0pt}%
  35       \setlength{\leftmargin}{#1}%
  36       \setlength{\rightmargin}{#2}%
  37       \setlength{\listparindent}{\parindent}%
  38       \setlength{\itemindent}{\parindent}%
  39       \setlength{\parsep}{\parskip}}%
  40   \item[]}{\end{list}}
  41 \def\newblock{\hskip}
  42 \newenvironment{paperquote}{%
  43   \begin{quote}%
  44      \it
  45   }%
  46   {\end{quote}}
  47 \renewcommand{\textfraction}{0.15}
  48 \renewcommand{\topfraction}{0.85}
  49 \renewcommand{\bottomfraction}{0.65}
  50 \renewcommand{\floatpagefraction}{0.60}
  51 %\renewcommand{\baselinestretch}{1.8}
  52 \newenvironment{enumerate*}%
  53   {\begin{enumerate}%
  54     \setlength{\itemsep}{0pt}%
  55     \setlength{\parskip}{0pt}}%
  56   {\end{enumerate}}
  57 \newenvironment{itemize*}%
  58   {\begin{itemize}%
  59     \setlength{\itemsep}{0pt}%
  60     \setlength{\parskip}{0pt}}%
  61   {\end{itemize}}
  62 \oddsidemargin 0.0in
  63 \textwidth 6.5in
  64 \raggedbottom
  65 \clubpenalty = 10000
  66 \widowpenalty = 10000
  67 \pagestyle{fancy}
  68 \author{AUTHOR}
  69 \title{TITLE}
  70 \date{\ }
  71 \onehalfspacing
  72 \begin{document}
  73 %\maketitle
  74
  75 %\figure~\ref{fig:fasta3_search} on
  76 %page~\pageref{fig:fasta3_search} for {\tt fasta3} and in
  77 %figure~\ref{fig:blastp_search} on page~\pageref{fig:blastp_search} for
  78 %{\tt blastp}.
  79
  80 %\begin{figure}[htbp]
  81 %\centering
  82 %\includegraphics[width=1\textwidth]{blastp_image.jpg}
  83 %\caption{{\tt blastp}}
  84 %\label{fig:blastp_search}
  85 %\end{figure}
  86
  87 %\begin{table}[htbp]
  88 %\footnotesize
  89 %\begin{narrow}{-1in}{-1in}
  90 %\centering
  91 %\begin{tabular}{c c c c c c}
  92 %%IL7R$\alpha$ & {\it Homo sapiens} & P16871 & $2.6\cdot10^{-155}$ & $10^{-143}$ & $1.5\cdot10^{-181}$\\
  93 %\end{tabular}
  94 %\end{narrow}
  95 %\caption{Common Hits with Expect Values $< 10^{-10}$}
  96 %\label{tab:commonhits}
  97 %\end{table}
  98
  99
 100
 101 %\bibliographystyle{plain}
 102 %\bibliography{foo.bib}
 103
 104
 105 \end{document}