]> git.donarmstrong.com Git - neurodebian.git/log
neurodebian.git
11 years agoMerge branch 'master' into newdesign
Michael Hanke [Fri, 7 Dec 2012 08:38:03 +0000 (09:38 +0100)]
Merge branch 'master' into newdesign

* master:
  updated VM page for 6.0.6 (with the date when VM was wrapped on 1st of Oct)
  add remake to give it a page

Conflicts:
sphinx/vm.rst

11 years agoENH: tune up Tiziano's changes so we could process options from cmdline
Yaroslav Halchenko [Fri, 7 Dec 2012 03:46:17 +0000 (22:46 -0500)]
ENH: tune up Tiziano's changes so we could process options from cmdline

templating/options handling could be greatly improved ;)

11 years agopreseed.cfg becomes an .in for Python string interpolations
Yaroslav Halchenko [Thu, 6 Dec 2012 20:44:38 +0000 (15:44 -0500)]
preseed.cfg becomes an .in for Python string interpolations

11 years agoENH: nd_build_testrdepends -- sign the temporary repository with the package (use...
Yaroslav Halchenko [Thu, 6 Dec 2012 00:08:44 +0000 (19:08 -0500)]
ENH: nd_build_testrdepends -- sign the temporary repository with the package (use apt-ftparchive)

11 years agoENH: Make neurodebian.cfg also visible on the website so we could easily fetch up...
Yaroslav Halchenko [Mon, 3 Dec 2012 15:15:07 +0000 (10:15 -0500)]
ENH: Make neurodebian.cfg also visible on the website so we could easily fetch up-to-date version if needed

11 years agoENH: improved nd_querycfg a bit: query content of a section or list of sections
Yaroslav Halchenko [Mon, 3 Dec 2012 15:12:22 +0000 (10:12 -0500)]
ENH: improved nd_querycfg a bit: query content of a section or list of sections

11 years agoChanges for Lin4Neuro from Kiyotaka Nemoto
Yaroslav Halchenko [Fri, 30 Nov 2012 14:17:38 +0000 (09:17 -0500)]
Changes for Lin4Neuro from Kiyotaka Nemoto

11 years agoThomas's suggested description for the mirror
Yaroslav Halchenko [Fri, 2 Nov 2012 17:15:44 +0000 (13:15 -0400)]
Thomas's suggested description for the mirror

11 years agoRemove umlaut's from de-m mirror name -- breaks the build
Yaroslav Halchenko [Fri, 2 Nov 2012 15:26:13 +0000 (11:26 -0400)]
Remove umlaut's from de-m mirror name -- breaks the build

11 years agoAdded de-m mirror (INCF G-Node), Thanks Thomas Wachtler
Yaroslav Halchenko [Fri, 2 Nov 2012 13:50:34 +0000 (09:50 -0400)]
Added de-m mirror (INCF G-Node), Thanks Thomas Wachtler

11 years agoalias for openvibe
Yaroslav Halchenko [Tue, 30 Oct 2012 13:56:05 +0000 (09:56 -0400)]
alias for openvibe

11 years agoAdding ubuntu quantal (nd12.10) into "supported"
Yaroslav Halchenko [Mon, 22 Oct 2012 20:10:18 +0000 (16:10 -0400)]
Adding ubuntu quantal (nd12.10) into "supported"

11 years agolittle TODO in nd_createappliance on preseeding solution
Yaroslav Halchenko [Mon, 22 Oct 2012 12:50:46 +0000 (08:50 -0400)]
little TODO in nd_createappliance on preseeding solution

11 years agobrochure -- very minor from native speakers
Yaroslav Halchenko [Thu, 11 Oct 2012 15:52:10 +0000 (11:52 -0400)]
brochure -- very minor from native speakers

11 years agomore items and a bit of indentation -- printing now
Yaroslav Halchenko [Thu, 11 Oct 2012 13:21:01 +0000 (09:21 -0400)]
more items and a bit of indentation -- printing now

11 years agoadded rudimentary README.txt on how to build brochure
Yaroslav Halchenko [Mon, 8 Oct 2012 14:20:10 +0000 (10:20 -0400)]
added rudimentary README.txt on how to build brochure

11 years agoupdated VM page for 6.0.6 (with the date when VM was wrapped on 1st of Oct)
Yaroslav Halchenko [Thu, 4 Oct 2012 20:31:45 +0000 (16:31 -0400)]
updated VM page for 6.0.6 (with the date when VM was wrapped on 1st of Oct)

11 years agoadd remake to give it a page
Yaroslav Halchenko [Thu, 4 Oct 2012 19:08:55 +0000 (15:08 -0400)]
add remake to give it a page

11 years agoVM proxy help.
Michael Hanke [Tue, 2 Oct 2012 12:22:46 +0000 (14:22 +0200)]
VM proxy help.

11 years agoMerge branch 'master' into newdesign
Michael Hanke [Tue, 2 Oct 2012 12:17:35 +0000 (14:17 +0200)]
Merge branch 'master' into newdesign

* master:
  changelog + nd-vmsetupwizard: Preparing 0.29 release of neurodebian for updated nd-vmsetupwizard
  Make ymax dynamic (5% above current max value), per each distribution + labels for every other month
  A slight overhaul of the brochure -- nothing radical but at least it is up to date now

11 years agochangelog + nd-vmsetupwizard: Preparing 0.29 release of neurodebian for updated nd...
Yaroslav Halchenko [Mon, 1 Oct 2012 18:11:00 +0000 (14:11 -0400)]
changelog + nd-vmsetupwizard: Preparing 0.29 release of neurodebian for updated nd-vmsetupwizard

* VM (6.0.6):
  - base on 6.0.6 Debian point release (finally version of NeuroDebian
    VM is in sync with the Debian release)
  - nd-vmsetupwizard:
    - robustify check/linking of $HOME/host
    - optional installations dialog:
      - set height of the dialog to 450 for to fit all list items
      - refactored "GIMP" section into "Graphics" which would install
        also inkscape, vym and svgtune
      - added sections for "PyMVPA tutorial", and different collections of
        Python modules (Neuroimaging, Electrophysiology, etc)
      - Python selections depend on ipython01x instead of older ipython
        to provide IPython notebooks facilities out-of-the-box

11 years agoPage navigation for VM
Michael Hanke [Fri, 28 Sep 2012 06:42:01 +0000 (08:42 +0200)]
Page navigation for VM

11 years agoVM docs overhaul.
Michael Hanke [Fri, 28 Sep 2012 06:36:29 +0000 (08:36 +0200)]
VM docs overhaul.

11 years agoOptional coffee art gallery
Michael Hanke [Wed, 26 Sep 2012 12:15:14 +0000 (14:15 +0200)]
Optional coffee art gallery

11 years agoAuto-detect youtube links and turn them into buttons...
Michael Hanke [Wed, 26 Sep 2012 11:16:52 +0000 (13:16 +0200)]
Auto-detect youtube links and turn them into buttons...

... that open a fancy JS player.

11 years agoVarious style fixed and improved non-javascript performance.
Michael Hanke [Wed, 26 Sep 2012 06:45:12 +0000 (08:45 +0200)]
Various style fixed and improved non-javascript performance.

11 years agoMake ymax dynamic (5% above current max value), per each distribution + labels for...
Yaroslav Halchenko [Tue, 25 Sep 2012 19:16:24 +0000 (15:16 -0400)]
Make ymax dynamic (5% above current max value), per each distribution + labels for every other month

11 years agoA slight overhaul of the brochure -- nothing radical but at least it is up to date now
Yaroslav Halchenko [Tue, 25 Sep 2012 15:42:22 +0000 (11:42 -0400)]
A slight overhaul of the brochure -- nothing radical but at least it is up to date now

11 years agoMore polish.
Michael Hanke [Tue, 25 Sep 2012 14:33:02 +0000 (16:33 +0200)]
More polish.

11 years agoVarious bits polished.
Michael Hanke [Mon, 24 Sep 2012 08:56:33 +0000 (10:56 +0200)]
Various bits polished.

11 years agoBetter navigation on testimonials page.
Michael Hanke [Mon, 24 Sep 2012 06:51:01 +0000 (08:51 +0200)]
Better navigation on testimonials page.

11 years agoBehave nicely when identi.ca is unavailable
Michael Hanke [Mon, 24 Sep 2012 06:50:30 +0000 (08:50 +0200)]
Behave nicely when identi.ca is unavailable

11 years agoFix up footer style
Michael Hanke [Mon, 24 Sep 2012 06:50:12 +0000 (08:50 +0200)]
Fix up footer style

11 years agoMerge branch 'master' into newdesign
Michael Hanke [Sun, 23 Sep 2012 19:10:34 +0000 (21:10 +0200)]
Merge branch 'master' into newdesign

* master:
  injected spykeview
  BF: added an alias for neo (python-neo)

11 years agoAdd twitter button.
Michael Hanke [Sun, 23 Sep 2012 19:06:30 +0000 (21:06 +0200)]
Add twitter button.

11 years agoRemove two buttons that don't have to be on every page.
Michael Hanke [Sun, 23 Sep 2012 18:54:37 +0000 (20:54 +0200)]
Remove two buttons that don't have to be on every page.

11 years agoFew more front-page bits.
Michael Hanke [Sun, 23 Sep 2012 16:42:02 +0000 (18:42 +0200)]
Few more front-page bits.

11 years agoFirst complete draft of the new frontpage.
Michael Hanke [Sun, 23 Sep 2012 16:31:12 +0000 (18:31 +0200)]
First complete draft of the new frontpage.

11 years agoEnable mirror download of VM image from front page.
Michael Hanke [Sun, 23 Sep 2012 12:42:45 +0000 (14:42 +0200)]
Enable mirror download of VM image from front page.

11 years agoAdd G+ social media madness.
Michael Hanke [Sat, 22 Sep 2012 19:44:34 +0000 (21:44 +0200)]
Add G+ social media madness.

11 years agoFix broken button links.
Michael Hanke [Sat, 22 Sep 2012 19:44:23 +0000 (21:44 +0200)]
Fix broken button links.

11 years agoFirst wave of the website redesign.
Michael Hanke [Fri, 21 Sep 2012 18:54:51 +0000 (20:54 +0200)]
First wave of the website redesign.

11 years agoinjected spykeview
Yaroslav Halchenko [Sat, 15 Sep 2012 10:59:14 +0000 (06:59 -0400)]
injected spykeview

11 years agoBF: added an alias for neo (python-neo)
Yaroslav Halchenko [Sat, 15 Sep 2012 10:06:05 +0000 (06:06 -0400)]
BF: added an alias for neo (python-neo)

11 years agoDOC: Note the chrooting is no longer necessary for FSLView.
Michael Hanke [Fri, 14 Sep 2012 10:31:22 +0000 (12:31 +0200)]
DOC: Note the chrooting is no longer necessary for FSLView.

11 years agoYet another markup fix.
Michael Hanke [Tue, 4 Sep 2012 14:09:45 +0000 (16:09 +0200)]
Yet another markup fix.

11 years agoSmall fix.
Michael Hanke [Tue, 4 Sep 2012 09:56:12 +0000 (11:56 +0200)]
Small fix.

11 years agoAdd video link.
Michael Hanke [Tue, 4 Sep 2012 09:50:11 +0000 (11:50 +0200)]
Add video link.

11 years agoAdd new talk.
Michael Hanke [Sun, 2 Sep 2012 09:46:50 +0000 (11:46 +0200)]
Add new talk.

11 years agoWIP: clean up a bit the kernel installation and mirroring
Tiziano Zito [Thu, 30 Aug 2012 13:54:18 +0000 (15:54 +0200)]
WIP: clean up a bit the kernel installation and mirroring

11 years agoWIP: work on locale and remove HTTP server
Tiziano Zito [Thu, 30 Aug 2012 13:53:53 +0000 (15:53 +0200)]
WIP: work on locale and remove HTTP server

this should be factored out and become a command line option
to the create appliance scripts...

11 years agoWIP: do not use external HTTP server
Tiziano Zito [Thu, 30 Aug 2012 13:53:05 +0000 (15:53 +0200)]
WIP: do not use external HTTP server

11 years agoBF: use valentin's last name without umlaut
Yaroslav Halchenko [Wed, 29 Aug 2012 00:46:40 +0000 (20:46 -0400)]
BF: use valentin's last name without umlaut

11 years agoAdded Valentin's mirror as [de-v] and [de] became [de-md]
Yaroslav Halchenko [Tue, 28 Aug 2012 14:06:32 +0000 (10:06 -0400)]
Added Valentin's mirror as [de-v] and [de] became [de-md]

11 years agoadded blends injection for patchclamp
Yaroslav Halchenko [Tue, 28 Aug 2012 13:40:13 +0000 (09:40 -0400)]
added blends injection for patchclamp

11 years agotrying to switch from gnome to more lightweight XFCE. TODOs are in the initial_setup...
Yaroslav Halchenko [Tue, 21 Aug 2012 16:38:52 +0000 (12:38 -0400)]
trying to switch from gnome to more lightweight XFCE. TODOs are in the initial_setup script

11 years agofighting seeding keyboard for wheezy
Yaroslav Halchenko [Tue, 21 Aug 2012 16:38:05 +0000 (12:38 -0400)]
fighting seeding keyboard for wheezy

11 years agoadded freeipmi to the list
Yaroslav Halchenko [Tue, 7 Aug 2012 13:25:05 +0000 (09:25 -0400)]
added freeipmi to the list

11 years agoBF: in fslview blogpost -- add export FSLDIR into the /usr/local/bin/fslview wrapper
Yaroslav Halchenko [Wed, 1 Aug 2012 20:58:28 +0000 (16:58 -0400)]
BF: in fslview blogpost -- add export FSLDIR into the /usr/local/bin/fslview wrapper

since, as troubleshooted on the mailing list, users using recent fsl
version on their system might have it pointing to the versioned
path thus forbidding fslview to find atlases within the chroot

11 years agoENH: for full gnome3 "experience" add gnome-disk-utility network-manager-gnome
Yaroslav Halchenko [Fri, 20 Jul 2012 18:43:30 +0000 (14:43 -0400)]
ENH: for full gnome3 "experience" add gnome-disk-utility network-manager-gnome

otherwise would puke error and fall into fallback mode (which is not
necessarily a bad thing). Altogether we might better be with XFCE anyways

11 years agoENH: nd-vmsetupwizard for wheezy -- robust link, meta-selections for R, PyMVPA; remov...
Yaroslav Halchenko [Fri, 20 Jul 2012 16:45:37 +0000 (12:45 -0400)]
ENH: nd-vmsetupwizard for wheezy -- robust link, meta-selections for R, PyMVPA; removed Sun java plugin

also extended list for Scientific python to include spyder and pandas

11 years agoENH: adjusted initial_setup and preseed.cfg for wheezy
Yaroslav Halchenko [Fri, 20 Jul 2012 16:44:09 +0000 (12:44 -0400)]
ENH: adjusted initial_setup and preseed.cfg for wheezy

11 years agoBF: gues-additions -- autologin for both Gnome 2 and 3
Yaroslav Halchenko [Fri, 20 Jul 2012 16:43:34 +0000 (12:43 -0400)]
BF: gues-additions -- autologin for both Gnome 2 and 3

11 years agoChangelog entries to summarize changes for 0.28
Yaroslav Halchenko [Fri, 20 Jul 2012 03:54:18 +0000 (23:54 -0400)]
Changelog entries to summarize changes for 0.28

11 years agoneurodebian-guest-additions: in preparation for wheezy NeuroDebian VM appliance added...
Yaroslav Halchenko [Fri, 20 Jul 2012 03:46:20 +0000 (23:46 -0400)]
neurodebian-guest-additions: in preparation for wheezy NeuroDebian VM appliance added option for gdm3

11 years agotrying to find matching preseeding for keyboard + ship initial_setup from wheezy...
Yaroslav Halchenko [Thu, 19 Jul 2012 22:16:15 +0000 (18:16 -0400)]
trying to find matching preseeding for keyboard + ship initial_setup from wheezy/ dir

11 years agocopied squeeze d-i seeding into one for wheezy
Yaroslav Halchenko [Mon, 16 Jul 2012 21:11:06 +0000 (17:11 -0400)]
copied squeeze d-i seeding into one for wheezy

11 years agoSlight adjustment of the download stats range
Michael Hanke [Wed, 4 Jul 2012 13:19:11 +0000 (15:19 +0200)]
Slight adjustment of the download stats range

no going to high, beause July is still changing.

11 years agoAdd talk reference.
Michael Hanke [Mon, 25 Jun 2012 12:01:10 +0000 (14:01 +0200)]
Add talk reference.

12 years agoENH: nd_build_testrdepends to get names of all binary packages build-depends of which...
Yaroslav Halchenko [Mon, 18 Jun 2012 19:04:15 +0000 (15:04 -0400)]
ENH: nd_build_testrdepends to get names of all binary packages build-depends of which to test

12 years agoENH: link to the mirrors-status page
Yaroslav Halchenko [Tue, 12 Jun 2012 21:54:46 +0000 (17:54 -0400)]
ENH: link to the mirrors-status page

12 years agoadd guacamole to be listed on the website
Yaroslav Halchenko [Tue, 12 Jun 2012 17:42:52 +0000 (13:42 -0400)]
add guacamole to be listed on the website

12 years agoBF: doh -- we do not care atm about return status of mirmon update and its grep
Yaroslav Halchenko [Mon, 11 Jun 2012 18:29:04 +0000 (14:29 -0400)]
BF: doh -- we do not care atm about return status of mirmon update and its grep

12 years agoENH: mask out mirmon failures due to missing timestamp: invalid date .DOCTYPE
Yaroslav Halchenko [Mon, 11 Jun 2012 18:05:55 +0000 (14:05 -0400)]
ENH: mask out mirmon failures due to missing timestamp: invalid date .DOCTYPE

12 years agoBF: $$ for Makefile
Yaroslav Halchenko [Fri, 8 Jun 2012 17:46:17 +0000 (13:46 -0400)]
BF: $$ for Makefile

12 years agoENH: reuse header/trailer of the main page as the wrap for mirrors-status.html
Yaroslav Halchenko [Fri, 8 Jun 2012 17:45:21 +0000 (13:45 -0400)]
ENH: reuse header/trailer of the main page as the wrap for mirrors-status.html

12 years agoENH: mirmon and refresh (the one to be called hourly from cron) Makefile rules
Yaroslav Halchenko [Fri, 8 Jun 2012 17:19:58 +0000 (13:19 -0400)]
ENH: mirmon and refresh (the one to be called hourly from cron) Makefile rules

12 years agoENH: configuration file for mirmon
Yaroslav Halchenko [Fri, 8 Jun 2012 17:19:15 +0000 (13:19 -0400)]
ENH: configuration file for mirmon

12 years agoENH: generate mirrors lists for mirmon
Yaroslav Halchenko [Fri, 8 Jun 2012 16:43:31 +0000 (12:43 -0400)]
ENH: generate mirrors lists for mirmon

12 years agoprovide url for neurodebian G+
Yaroslav Halchenko [Fri, 8 Jun 2012 15:38:00 +0000 (11:38 -0400)]
provide url for neurodebian G+

12 years agoMention the paper in all possible places and shorten other bits.
Michael Hanke [Wed, 6 Jun 2012 07:35:07 +0000 (09:35 +0200)]
Mention the paper in all possible places and shorten other bits.

12 years agoDOC: use direct frontiersin url instead of not-yet-active doi
Yaroslav Halchenko [Tue, 5 Jun 2012 18:00:13 +0000 (14:00 -0400)]
DOC: use direct frontiersin url instead of not-yet-active doi

12 years agoDOC: minor consistent spacing
Yaroslav Halchenko [Tue, 5 Jun 2012 17:59:45 +0000 (13:59 -0400)]
DOC: minor consistent spacing

12 years agoMerge branch 'master' of git://git.debian.org/pkg-exppsy/neurodebian
NeuroDebian Wizard [Tue, 5 Jun 2012 16:50:12 +0000 (12:50 -0400)]
Merge branch 'master' of git://git.debian.org/pkg-exppsy/neurodebian

12 years agoMore robust against DB errors.
Michael Hanke [Tue, 5 Jun 2012 16:48:39 +0000 (12:48 -0400)]
More robust against DB errors.

12 years agoMore robust against DB errors.
Michael Hanke [Tue, 5 Jun 2012 16:48:39 +0000 (12:48 -0400)]
More robust against DB errors.

12 years agoAdd fresh paper.
Michael Hanke [Tue, 5 Jun 2012 13:27:56 +0000 (15:27 +0200)]
Add fresh paper.

12 years agoAdded (did not add to TOC) a brief description on how to use vagus
Yaroslav Halchenko [Wed, 30 May 2012 13:21:03 +0000 (09:21 -0400)]
Added (did not add to TOC) a brief description on how to use vagus

12 years agoadded manually python-skimage
Yaroslav Halchenko [Tue, 8 May 2012 04:04:57 +0000 (00:04 -0400)]
added manually python-skimage

12 years agoENH: added testimonials groupped for few common topics (e.g. virtualization)
Yaroslav Halchenko [Mon, 7 May 2012 16:28:35 +0000 (12:28 -0400)]
ENH: added testimonials groupped for few common topics (e.g. virtualization)

12 years agoadjustments to quotes-nihr01.rst (before I realized that it was auto-generated :-/)
Yaroslav Halchenko [Mon, 7 May 2012 16:27:57 +0000 (12:27 -0400)]
adjustments to quotes-nihr01.rst (before I realized that it was auto-generated :-/)

12 years agodebian-archive-keyring into Recommends for -dev pkg
Yaroslav Halchenko [Mon, 7 May 2012 12:52:06 +0000 (08:52 -0400)]
debian-archive-keyring into Recommends for -dev pkg

to assure that nd_adddist has the keys on ubuntu system

12 years agoMerge pull request #4 from esc/fix/building-debian-packages-on-ubuntu
Michael Hanke [Mon, 7 May 2012 09:15:47 +0000 (02:15 -0700)]
Merge pull request #4 from esc/fix/building-debian-packages-on-ubuntu

Fix/building debian packages on ubuntu

12 years agoMerge pull request #3 from esc/master
Michael Hanke [Mon, 7 May 2012 08:10:03 +0000 (01:10 -0700)]
Merge pull request #3 from esc/master

small typo fix

12 years agoBF: fix building debian packages on ubuntu
Valentin Haenel [Mon, 7 May 2012 07:47:13 +0000 (09:47 +0200)]
BF: fix building debian packages on ubuntu

As discussed in the thread:

http://lists.alioth.debian.org/pipermail/neurodebian-users/2012-May/000411.html

nd_adddist fails to create cow images for debian versions when using it on
ubuntu.

The error is:

E: Release signed by unknown key (key id AED4B06F473041FA)

To fix this, we need to explicitly tell it to use the debian archive keyring
when building on ubuntu.

12 years agoBF/FO: fix mixing tabs and spaces
Valentin Haenel [Mon, 7 May 2012 07:46:31 +0000 (09:46 +0200)]
BF/FO: fix mixing tabs and spaces

12 years agoBF: typo fix of typo fix, currently with two 'r's
Valentin Haenel [Mon, 7 May 2012 07:38:55 +0000 (09:38 +0200)]
BF: typo fix of typo fix, currently with two 'r's

12 years agoBF: typo in cmdsettings.sh
Valentin Haenel [Mon, 7 May 2012 07:29:09 +0000 (10:29 +0300)]
BF: typo in cmdsettings.sh

12 years agoRIP lenny
Yaroslav Halchenko [Thu, 3 May 2012 18:25:34 +0000 (14:25 -0400)]
RIP lenny

12 years agoENH: explicitly sort suites by release (freshiest first), modelines, remove use of...
Yaroslav Halchenko [Wed, 2 May 2012 16:09:14 +0000 (12:09 -0400)]
ENH: explicitly sort suites by release (freshiest first), modelines, remove use of new= (we have fresh enough numpy)

Also adjusted example zgrep line so it gets all mirrors, avoids duplication due to taking both access.log and access-comb.log