public:
VennCommand(string);
+ VennCommand();
~VennCommand();
+ vector<string> getRequiredParameters();
+ vector<string> getValidParameters();
+ vector<string> getRequiredFiles();
+ map<string, vector<string> > getOutputFiles() { return outputTypes; }
int execute();
void help();
bool abort, allLines, nseqs, perm;
set<string> labels; //holds labels to be used
string format, groups, calc, label, outputDir;
- vector<string> Estimators, Groups;
+ vector<string> Estimators, Groups, outputNames;
+ map<string, vector<string> > outputTypes;
set< set<int> > findCombinations(int);
int getCombos(set<int>, set< set<int> >&);