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samtools.git
2009-07-31 Heng Li * samtools-0.1.5-18 (r423) commit | commitdiff | tree | snapshot
2009-07-30 Heng Liconvert BLAT psl to SAM. commit | commitdiff | tree | snapshot
2009-07-30 Heng Li * samtools-0.1.5-17 (r422) commit | commitdiff | tree | snapshot
2009-07-30 Heng Li * samtools-0.1.5-16 (r421) commit | commitdiff | tree | snapshot
2009-07-29 Heng Lido not set "read 1" if reads are not mapped in the... commit | commitdiff | tree | snapshot
2009-07-28 Heng Li * samtools-0.1.5-15 (r419) commit | commitdiff | tree | snapshot
2009-07-24 Heng Liskip @header lines in SAM commit | commitdiff | tree | snapshot
2009-07-24 Heng Li * samtools-0.1.5-14 (r417) commit | commitdiff | tree | snapshot
2009-07-24 Heng Li * samtools-0.1.5-17 (r416) commit | commitdiff | tree | snapshot
2009-07-24 Heng Li * samtools-0.1.5-12 (r415) commit | commitdiff | tree | snapshot
2009-07-22 Heng Lifixed a compiling error (thank Ken for fixing it) commit | commitdiff | tree | snapshot
2009-07-21 Heng LiImplemented Boyer-Moore search in the kstring library. commit | commitdiff | tree | snapshot
2009-07-17 Heng Lido not include knetfile.h when _USE_KNETFILE is not... commit | commitdiff | tree | snapshot
2009-07-17 Heng Li * samtools-0.1.5-11 (r408) commit | commitdiff | tree | snapshot
2009-07-17 Heng Li * samtools-0.1.5-10 (r407) commit | commitdiff | tree | snapshot
2009-07-16 Heng LiSorry. The old Makefile is for PDCurses... commit | commitdiff | tree | snapshot
2009-07-16 Heng Li * samtools-0.1.5-9 (r405) commit | commitdiff | tree | snapshot
2009-07-16 Heng Li * samtools-0.1.5-8 (r404) commit | commitdiff | tree | snapshot
2009-07-16 Heng Li * samtools-0.1.5-7 (r403) commit | commitdiff | tree | snapshot
2009-07-16 Heng Li * samtools-0.1.5-6 (r402) commit | commitdiff | tree | snapshot
2009-07-13 Heng Li * move bam_lite.c to bam-lite commit | commitdiff | tree | snapshot
2009-07-13 Heng Li * samtools-0.1.5-5 (r395) commit | commitdiff | tree | snapshot
2009-07-12 Heng Li * samtools-0.1.5-4 (r394) commit | commitdiff | tree | snapshot
2009-07-12 Heng Li * samtools-0.1.5-3 (r393) commit | commitdiff | tree | snapshot
2009-07-12 Heng LiRemove the warning in tview commit | commitdiff | tree | snapshot
2009-07-12 Heng Li * samtools-0.1.5-2 (r391) commit | commitdiff | tree | snapshot
2009-07-09 Heng Li * samtools-0.1.5-1 (r390) commit | commitdiff | tree | snapshot
2009-07-07 Heng LiRelease samtools-0.1.5c (fixed a bug in piping) commit | commitdiff | tree | snapshot
2009-07-07 Heng LiRelease samtools-0.1.5b (BUG! so embarrassing!) commit | commitdiff | tree | snapshot
2009-07-07 Heng LiRelease samtools-0.1.5a (for compatibility with Bio... commit | commitdiff | tree | snapshot
2009-07-07 Heng LiRelease samtools-0.1.5 commit | commitdiff | tree | snapshot
2009-07-07 Heng Li * samtools-0.1.4-23 (r372) commit | commitdiff | tree | snapshot
2009-07-07 Heng Liupdate documentation commit | commitdiff | tree | snapshot
2009-07-02 On behalf of... Introduced LIBPATH variable so this could be overridden... commit | commitdiff | tree | snapshot
2009-07-02 Heng Li * samtools-0.1.4-22 (r369) commit | commitdiff | tree | snapshot
2009-07-02 Heng Li * samtools-0.1.4-21 (r368) commit | commitdiff | tree | snapshot
2009-06-30 Heng Lireduce the chance of blocking in FTP connection commit | commitdiff | tree | snapshot
2009-06-30 Heng Liminor changes to knetfile: invalid fd equals -1 rather... commit | commitdiff | tree | snapshot
2009-06-30 Heng Li * samtools-0.1.4-20 (r365) commit | commitdiff | tree | snapshot
2009-06-30 Heng Li * samtools-0.1.4-19 (r364) commit | commitdiff | tree | snapshot
2009-06-29 Heng Li * samtools-0.1.4-18 (r363) commit | commitdiff | tree | snapshot
2009-06-25 Heng Liwrite changelog commit | commitdiff | tree | snapshot
2009-06-25 Heng Li * samtools-0.1.4-17 (r361) commit | commitdiff | tree | snapshot
2009-06-25 Heng Li * samtools-0.1.4-16 (r360) commit | commitdiff | tree | snapshot
2009-06-25 Heng Lifixed bugs in knetfile.* commit | commitdiff | tree | snapshot
2009-06-25 Heng Lithis is the header file commit | commitdiff | tree | snapshot
2009-06-25 Heng Li * open a file at FTP commit | commitdiff | tree | snapshot
2009-06-24 Heng Li * samtools-0.1.4-15 (r354) commit | commitdiff | tree | snapshot
2009-06-17 Heng Li * samtools-0.1.4-13 (r351) commit | commitdiff | tree | snapshot
2009-06-16 Heng Li * samtools-0.1.4-13 (r350) commit | commitdiff | tree | snapshot
2009-06-13 Heng Li * samtools-0.1.4-12 (r347) commit | commitdiff | tree | snapshot
2009-06-13 Heng Li * samtools-0.1.4-11 (r346) commit | commitdiff | tree | snapshot
2009-06-13 Heng Liadded more comments commit | commitdiff | tree | snapshot
2009-06-13 Heng Linothing really commit | commitdiff | tree | snapshot
2009-06-13 Heng Liadded an example of calculating read depth commit | commitdiff | tree | snapshot
2009-06-13 Heng Li * samtools-0.1.4-10 (r341) commit | commitdiff | tree | snapshot
2009-06-13 Heng Li * samtools-0.1.4-9 (r340) commit | commitdiff | tree | snapshot
2009-06-13 Heng Liupdate INSTALL commit | commitdiff | tree | snapshot
2009-06-12 Heng Li * samtools-0.1.4-8 (r338) commit | commitdiff | tree | snapshot
2009-06-12 Heng Li * samtools-0.1.4-7 (r337) commit | commitdiff | tree | snapshot
2009-06-12 Heng Li * no changes to samtools itself commit | commitdiff | tree | snapshot
2009-06-12 Heng Liremove zlib for simplification... commit | commitdiff | tree | snapshot
2009-06-12 Heng Li * samtools-0.1.4-6 (r334) commit | commitdiff | tree | snapshot
2009-06-12 Heng Liupdate ChangeLog commit | commitdiff | tree | snapshot
2009-06-12 Heng Lifixed minor things in Makefile commit | commitdiff | tree | snapshot
2009-06-12 Heng Li * samtools-0.1.4-5 (r3310 commit | commitdiff | tree | snapshot
2009-06-12 Heng Liupdate information... commit | commitdiff | tree | snapshot
2009-06-12 Heng Li * updated novoalign converter by Colin Hercus et al. commit | commitdiff | tree | snapshot
2009-06-12 Heng Li * update Makefile commit | commitdiff | tree | snapshot
2009-06-12 Heng Li * added zlib-1.2.3 as razip requires that commit | commitdiff | tree | snapshot
2009-06-12 Heng LiUnfinished commit | commitdiff | tree | snapshot
2009-06-10 Heng Li * samtools-0.1.4-4 (r325) commit | commitdiff | tree | snapshot
2009-06-10 Heng Li * samtools-0.1.4-3 (r324) commit | commitdiff | tree | snapshot
2009-06-10 Heng Li * samtools.pl-0.3.2 (r322) commit | commitdiff | tree | snapshot
2009-06-10 Heng Lifixed a typo commit | commitdiff | tree | snapshot
2009-06-09 Heng Lijust typo. no real change commit | commitdiff | tree | snapshot
2009-06-08 Heng Lia little bit code cleanup commit | commitdiff | tree | snapshot
2009-06-08 Heng Li * samtools.pl-0.3.1 commit | commitdiff | tree | snapshot
2009-06-08 Heng Li * samtools.pl-0.3.0 commit | commitdiff | tree | snapshot
2009-06-08 Heng Li * samtools.pl-0.2.3 commit | commitdiff | tree | snapshot
2009-06-08 Heng Li * samtools-0.1.4-2 (r316) commit | commitdiff | tree | snapshot
2009-06-04 Heng Li * samtools.pl-0.2.2 commit | commitdiff | tree | snapshot
2009-06-03 Heng Li * in snpFilter, suppress non-SNP sites commit | commitdiff | tree | snapshot
2009-06-01 Heng Li * samtools.pl-0.2.1 commit | commitdiff | tree | snapshot
2009-06-01 Heng Li * samtools.pl-0.2.0 commit | commitdiff | tree | snapshot
2009-05-28 Heng Li * minor changes to bgzf: return NULL if fd == -1 commit | commitdiff | tree | snapshot
2009-05-28 Heng LiScript for paired-end pileup, contributed by Stephen... commit | commitdiff | tree | snapshot
2009-05-28 Heng Li * samtools-0.1.4-1 (r304) commit | commitdiff | tree | snapshot
2009-05-21 Heng LiRelease samtools-0.1.4 commit | commitdiff | tree | snapshot
2009-05-21 Heng Li * samtools-0.1.3-24 (r296) commit | commitdiff | tree | snapshot
2009-05-21 Heng Li * samtools-0.1.3-23 (r295) commit | commitdiff | tree | snapshot
2009-05-20 Heng Liadded a missing header file commit | commitdiff | tree | snapshot
2009-05-19 Heng Li * samtools-0.1.3-22 (r293) commit | commitdiff | tree | snapshot
2009-05-18 Heng LiAdded a note to the manual. Currently SAMtools used... commit | commitdiff | tree | snapshot
2009-05-14 Heng Li * samtools-0.1.3-21 (286) commit | commitdiff | tree | snapshot
2009-05-13 Heng Li * samtools-0.1.3-20 (r276) commit | commitdiff | tree | snapshot
2009-05-12 Heng Li * samtools-0.1.3-19 (r275) commit | commitdiff | tree | snapshot
2009-05-12 Heng Li * samtools-0.1.3-18 (r273) commit | commitdiff | tree | snapshot
2009-05-12 Heng Lichange a parameter. It does nothing commit | commitdiff | tree | snapshot
2009-05-12 Heng Li * samtools-0.1.3-17 (r271) commit | commitdiff | tree | snapshot
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