added the format column

diff --git a/bam_plcmd.c b/bam_plcmd.c
index 82fcafc7f9c8836d839aef7ecaf26291ed1f89a0..34366332ecf895188c29b2a88e8a062d871ffe0d 100644 (file)
--- a/bam_plcmd.c
+++ b/bam_plcmd.c
@@ -602,6 +602,7 @@ static int mpileup(mplp_conf_t *conf, int n, char **fn)
                        printf("DP=%d;MQ=%d", depth, rms_q);
                        if (fpost >= 0. && fpost <= 1.) printf(";AF=%.3lg", 1. - fpost);
                        if (f >= 0. && f <= 1.) printf(";AFEM=%.3lg", 1. - f);
+                       printf("\tGT:GQ:DP");
                        if (fpost >= 0. && fpost <= 1.) {
                                for (i = 0; i < n; ++i) {
                                        int x = mc_call_gt(ma, fpost, i);