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Colin Dewey [Thu, 12 May 2011 16:24:19 +0000 (11:24 -0500)]
Added check in rsem-plot-model for .stat output directory
Bo Li [Tue, 26 Apr 2011 03:17:02 +0000 (22:17 -0500)]
fixed a bug in rsem-plot-model
Bo Li [Mon, 25 Apr 2011 19:00:49 +0000 (14:00 -0500)]
add feature that jump lines with # in gtf
Bo Li [Mon, 25 Apr 2011 18:19:40 +0000 (13:19 -0500)]
back to single threaded Gibbs
Bo Li [Mon, 25 Apr 2011 18:11:43 +0000 (13:11 -0500)]
back to single thread Gibbs
Bo Li [Mon, 25 Apr 2011 18:10:13 +0000 (13:10 -0500)]
Version with Gibbs parallelized
Bo Li [Thu, 21 Apr 2011 19:34:58 +0000 (14:34 -0500)]
a bug in simulation.cpp is fixed.
Bo Li [Thu, 21 Apr 2011 19:15:57 +0000 (14:15 -0500)]
a bug in *?Model.h was fixed.
Bo Li [Tue, 19 Apr 2011 18:33:50 +0000 (13:33 -0500)]
some changes
Bo Li [Mon, 18 Apr 2011 14:48:10 +0000 (09:48 -0500)]
RSEM v1.1.8
Bo Li [Mon, 18 Apr 2011 04:13:54 +0000 (23:13 -0500)]
RSEM v1.1.8
Bo Li [Sun, 17 Apr 2011 14:57:59 +0000 (09:57 -0500)]
lots of changes
Bo Li [Sat, 9 Apr 2011 03:28:12 +0000 (22:28 -0500)]
fixed a bug for transcript set as reference
Bo Li [Sat, 2 Apr 2011 06:47:49 +0000 (01:47 -0500)]
fix a bug in partition reads for parallel
Bo Li [Tue, 22 Mar 2011 02:05:24 +0000 (21:05 -0500)]
README.md is updated to include C++, Perl and R as prerequisites
Bo Li [Fri, 18 Mar 2011 20:37:35 +0000 (15:37 -0500)]
a bug in rsem-plot-model is fixed
Bo Li [Fri, 18 Mar 2011 18:31:33 +0000 (13:31 -0500)]
v1.1.5.b
Bo Li [Thu, 17 Mar 2011 10:39:07 +0000 (05:39 -0500)]
Fixed bugs in the Gibbs sampler. Fixed a bug which will set probF to 0 if the protocol is not forward strand specific.
Bo Li [Tue, 15 Mar 2011 15:52:16 +0000 (10:52 -0500)]
rsem-plot-model was changed again
Bo Li [Tue, 15 Mar 2011 04:14:29 +0000 (23:14 -0500)]
rsem-plot-model was modified
Bo Li [Fri, 11 Mar 2011 04:00:40 +0000 (22:00 -0600)]
rename plotModel.R to rsem-plot-model
Bo Li [Fri, 11 Mar 2011 03:31:52 +0000 (21:31 -0600)]
README.md changed
Bo Li [Fri, 11 Mar 2011 03:25:54 +0000 (21:25 -0600)]
Enable RSEM to visualize the model learned from data
Bo Li [Wed, 9 Mar 2011 17:49:32 +0000 (11:49 -0600)]
Fixed a bug related to output format. Grant read permession to all files and execution permession to all directories.
Bo Li [Mon, 21 Feb 2011 06:35:09 +0000 (00:35 -0600)]
README.md modified
Bo Li [Mon, 21 Feb 2011 06:30:28 +0000 (00:30 -0600)]
README.md
Bo Li [Mon, 21 Feb 2011 06:26:54 +0000 (00:26 -0600)]
README.md modified to display correctly in github
Bo Li [Mon, 21 Feb 2011 06:21:18 +0000 (00:21 -0600)]
README.md changed
Bo Li [Thu, 17 Feb 2011 17:53:53 +0000 (11:53 -0600)]
change README.txt to README.md
Bo Li [Thu, 17 Feb 2011 17:51:36 +0000 (11:51 -0600)]
change README.txt to README.md
Bo Li [Thu, 17 Feb 2011 15:12:25 +0000 (09:12 -0600)]
v1.1.2
Bo Li [Thu, 17 Feb 2011 14:34:20 +0000 (08:34 -0600)]
Normalized Read Fraction(nrf) are eliminated from outputs and posterior mean counts are added. A bug related to RSPD estimating is fixed
Bo Li [Thu, 17 Feb 2011 14:33:06 +0000 (08:33 -0600)]
Normalized Read Fraction(nrf) are eliminated from outputs and posterior mean counts are added. A bug related to RSPD estimating is fixed
Bo Li [Fri, 11 Feb 2011 05:39:07 +0000 (23:39 -0600)]
Bugs in SingleModel.h are fixed.
Bo Li [Wed, 9 Feb 2011 05:36:23 +0000 (23:36 -0600)]
RSEM Source Codes
projects / rsem.git / log