Allowed > 2^31 hits

[rsem.git] / BamConverter.h

diff --git a/BamConverter.h b/BamConverter.h
index af984ac4968c24a6a0c297154374bdaa32dbcd9e..bd81127d5fcb4728ad4e43efd9a0d9f723e4f78f 100644 (file)
--- a/BamConverter.h
+++ b/BamConverter.h
@@ -76,7 +76,7 @@ void BamConverter::process() {
        std::string cqname;
        bool isPaired = false;
 
-       int cnt = 0;
+       HIT_INT_TYPE cnt = 0;
 
        cqname = "";
        b = bam_init1(); b2 = bam_init1();