fixed io

diff --git a/kruskalwalliscommand.cpp b/kruskalwalliscommand.cpp
index de15a8b9cc05f6e8758e81dd1d4a659454eede27..39afca8c8acb0228a60d18b8df4da9a23eb6adef 100644 (file)
--- a/kruskalwalliscommand.cpp
+++ b/kruskalwalliscommand.cpp
@@ -141,7 +141,7 @@ int KruskalWallisCommand::execute(){
         
         //math goes here
         
-        int N = lookUp.size();
+        int N = lookup.size();
         double H;
         double tmp = 0.0;
         vector<groupRank> vec;

diff --git a/kruskalwalliscommand.h b/kruskalwalliscommand.h
index e3bf100bd2c8b468701f4aaee17c3807758d3f56..0fa8b683f25397173fc747d5edf0a276508ca72e 100644 (file)
--- a/kruskalwalliscommand.h
+++ b/kruskalwalliscommand.h
@@ -9,6 +9,8 @@
 #define        KRUSKALWALLISCOMMAND_H
 
 #include "command.hpp"
+#include "inputdata.h"
+#include "sharedrabundvector.h"
 
 
 class KruskalWallisCommand : public Command {
@@ -39,8 +41,10 @@ public:
     
     
 private:
-    string outputDir;
+    string outputDir, sharedfile;
     bool abort;
+    set<string> labels;
+    vector<string> outputNames;
     vector<int> counts;
     vector<double> rankSums;
     vector<double> rankMeans;