From 662c0b60d65f79f672ab199300b7ee4975233465 Mon Sep 17 00:00:00 2001
From: pschloss <pschloss>
Date: Thu, 3 Mar 2011 21:40:53 +0000
Subject: [PATCH] modified seqerror and qualscores

---
 Mothur.xcodeproj/project.pbxproj | 4 ++--
 qualityscores.cpp                | 1 -
 2 files changed, 2 insertions(+), 3 deletions(-)

diff --git a/Mothur.xcodeproj/project.pbxproj b/Mothur.xcodeproj/project.pbxproj
index ccb5aa2..e7b832a 100644
--- a/Mothur.xcodeproj/project.pbxproj
+++ b/Mothur.xcodeproj/project.pbxproj
@@ -1625,7 +1625,7 @@
 			attributes = {
 				ORGANIZATIONNAME = "Schloss Lab";
 			};
-			buildConfigurationList = 1DEB928908733DD80010E9CD /* Build configuration list for PBXProject "mothur" */;
+			buildConfigurationList = 1DEB928908733DD80010E9CD /* Build configuration list for PBXProject "Mothur" */;
 			compatibilityVersion = "Xcode 3.1";
 			developmentRegion = English;
 			hasScannedForEncodings = 1;
@@ -2049,7 +2049,7 @@
 			defaultConfigurationIsVisible = 0;
 			defaultConfigurationName = Release;
 		};
-		1DEB928908733DD80010E9CD /* Build configuration list for PBXProject "mothur" */ = {
+		1DEB928908733DD80010E9CD /* Build configuration list for PBXProject "Mothur" */ = {
 			isa = XCConfigurationList;
 			buildConfigurations = (
 				1DEB928A08733DD80010E9CD /* Debug */,
diff --git a/qualityscores.cpp b/qualityscores.cpp
index d57ef08..fca3d9f 100644
--- a/qualityscores.cpp
+++ b/qualityscores.cpp
@@ -308,7 +308,6 @@ void QualityScores::updateQScoreErrorMap(map<char, vector<int> >& qualErrorMap,
 	try {
 
 		int seqLength = errorSeq.size();
-		cout << start << '\t' << stop << '\t' << seqLength << endl;
 		
 		int qIndex = start - 1;
 		for(int i=0;i<seqLength;i++){
-- 
2.39.2