removed some couts from qualityscores.cpp

diff --git a/qualityscores.cpp b/qualityscores.cpp
index 0641d3b7bf4ed8abc588467b946d0678766c5fb0..3f8722f34f83416aa143f21a5a81e99c7329a7d8 100644 (file)
--- a/qualityscores.cpp
+++ b/qualityscores.cpp
@@ -82,7 +82,6 @@ QualityScores::QualityScores(ifstream& qFile){
 //                             if((letter == '>')){    qFile.putback(letter);  break;  }
 //                             else if (isprint(letter)) { scores += letter; }
 //                     }
-//                     cout << scores << endl;
 //                     m->gobble(qFile);
 //                     
 //                     break;
@@ -118,7 +117,6 @@ QualityScores::QualityScores(ifstream& qFile){
 string QualityScores::getName(){
        
        try {
-               cout << qScores.size() << '\t';
                return seqName;
        }
        catch(exception& e) {
@@ -153,9 +151,7 @@ void QualityScores::printQScores(ofstream& qFile){
 void QualityScores::trimQScores(int start, int end){
        try {
                vector<int> hold;
-               
-               cout << seqName << '\t' << qScores.size() << '\t' << start << '\t' << end << endl;
-               
+                       
                if(end == -1){          
                        hold = vector<int>(qScores.begin()+start, qScores.end());
                        qScores = hold;