added set.dir command and modified commands to redirect input and output, removed...

[mothur.git] / unifracunweightedcommand.h

diff --git a/unifracunweightedcommand.h b/unifracunweightedcommand.h
index 155fa75d6185d3d1bf10923ca56903a9e3e85aa8..c98abc48d748be4dcbb8928283d808b118db29b8 100644 (file)
--- a/unifracunweightedcommand.h
+++ b/unifracunweightedcommand.h
@@ -46,7 +46,7 @@ class UnifracUnweightedCommand : public Command {
                vector< map<float, float> > rCumul;  //map <unweighted score, cumulative percentage of number of random trees with that score or higher.> -vector entry for each combination.
                
                bool abort, phylip, random;
-               string groups, itersString;
+               string groups, itersString, outputDir;
                vector<string> Groups; //holds groups to be used
 
                ofstream outSum, out;