created mothurOut class to handle logfiles

[mothur.git] / taxonomyequalizer.h

diff --git a/taxonomyequalizer.h b/taxonomyequalizer.h
index 9f38b2f2a29756d751f10b6b8e97b4cc3925bd00..e060c9e8e1f58e28b1eb083287e697a364c05268 100644 (file)
--- a/taxonomyequalizer.h
+++ b/taxonomyequalizer.h
@@ -12,6 +12,7 @@
  */
 
 #include "mothur.h"
+#include "mothurout.h"
 
 //reads in taxonomy file and makes all the taxonomies the same length 
 //by appending the last taxon to a given taxonomy as many times as needed to 
@@ -39,7 +40,7 @@ private:
        void extendTaxonomy(string, string&, int);  //name, taxonomy, desired level
        void truncateTaxonomy(string, string&, int);  //name, taxonomy, desired level
        void removeConfidences(string&);  //removes the confidence limits on the taxon 
-
+       MothurOut* m;
        
 };