changed random forest output filename

[mothur.git] / suffixdb.cpp

diff --git a/suffixdb.cpp b/suffixdb.cpp
index 39a9b54945cf1fb0a7d4f8f29ecc323381784d1d..4fc342dd8bd26f7809ef93ce57da1b5563ee4ad1 100644 (file)
--- a/suffixdb.cpp
+++ b/suffixdb.cpp
@@ -26,6 +26,12 @@ SuffixDB::SuffixDB(int numSeqs) : Database() {
        suffixForest.resize(numSeqs);
        count = 0;
 }
+/**************************************************************************************************/
+
+SuffixDB::SuffixDB() : Database() {
+       count = 0;
+}
+
 /**************************************************************************************************/
 //assumes sequences have been added using addSequence
 vector<int> SuffixDB::findClosestSequences(Sequence* candidateSeq, int num){
@@ -55,7 +61,7 @@ vector<int> SuffixDB::findClosestSequences(Sequence* candidateSeq, int num){
                return topMatches;
        }
        catch(exception& e) {
-               errorOut(e, "SuffixDB", "findClosestSequences");
+               m->errorOut(e, "SuffixDB", "findClosestSequences");
                exit(1);
        }       
 }
@@ -67,7 +73,7 @@ void SuffixDB::addSequence(Sequence seq) {
                count++;
        }
        catch(exception& e) {
-               errorOut(e, "SuffixDB", "addSequence");
+               m->errorOut(e, "SuffixDB", "addSequence");
                exit(1);
        }
 }