X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=suffixdb.cpp;h=4fc342dd8bd26f7809ef93ce57da1b5563ee4ad1;hp=39a9b54945cf1fb0a7d4f8f29ecc323381784d1d;hb=050a3ff02473a3d4c0980964e1a9ebe52e55d6b8;hpb=63e089e0b3aad1741bab60119ed7ccc784dce347

diff --git a/suffixdb.cpp b/suffixdb.cpp
index 39a9b54..4fc342d 100644
--- a/suffixdb.cpp
+++ b/suffixdb.cpp
@@ -26,6 +26,12 @@ SuffixDB::SuffixDB(int numSeqs) : Database() {
 	suffixForest.resize(numSeqs);
 	count = 0;
 }
+/**************************************************************************************************/
+
+SuffixDB::SuffixDB() : Database() {
+	count = 0;
+}
+
 /**************************************************************************************************/
 //assumes sequences have been added using addSequence
 vector<int> SuffixDB::findClosestSequences(Sequence* candidateSeq, int num){
@@ -55,7 +61,7 @@ vector<int> SuffixDB::findClosestSequences(Sequence* candidateSeq, int num){
 		return topMatches;
 	}
 	catch(exception& e) {
-		errorOut(e, "SuffixDB", "findClosestSequences");
+		m->errorOut(e, "SuffixDB", "findClosestSequences");
 		exit(1);
 	}	
 }
@@ -67,7 +73,7 @@ void SuffixDB::addSequence(Sequence seq) {
 		count++;
 	}
 	catch(exception& e) {
-		errorOut(e, "SuffixDB", "addSequence");
+		m->errorOut(e, "SuffixDB", "addSequence");
 		exit(1);
 	}
 }