]> git.donarmstrong.com Git - mothur.git/blobdiff - sortseqscommand.h
changes while testing
[mothur.git] / sortseqscommand.h
index 4ba8e4294d4b7d01bc8de7ba57cef84817f718ce..c1de84e3876464a2216dbfaeeec3b153048ae34c 100644 (file)
@@ -25,8 +25,9 @@ public:
     vector<string> setParameters();
     string getCommandName()                    { return "sort.seqs";                           }
     string getCommandCategory()                { return "Sequence Processing";         }
-    string getOutputFileNameTag(string, string);
+    
        string getHelpString(); 
+    string getOutputPattern(string);   
     string getCitation() { return "http://www.mothur.org/wiki/Sort.seqs"; }
     string getDescription()            { return "puts sequences from a fasta, name, group, quality, flow or taxonomy file in the same order"; }