X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=sortseqscommand.h;h=c1de84e3876464a2216dbfaeeec3b153048ae34c;hp=4ba8e4294d4b7d01bc8de7ba57cef84817f718ce;hb=df7e3ff9f68ef157b0328a2d353c3258c5d45d89;hpb=90708fe9701e3827e477c82fb3652539c3bf2a0d diff --git a/sortseqscommand.h b/sortseqscommand.h index 4ba8e42..c1de84e 100644 --- a/sortseqscommand.h +++ b/sortseqscommand.h @@ -25,8 +25,9 @@ public: vector setParameters(); string getCommandName() { return "sort.seqs"; } string getCommandCategory() { return "Sequence Processing"; } - string getOutputFileNameTag(string, string); + string getHelpString(); + string getOutputPattern(string); string getCitation() { return "http://www.mothur.org/wiki/Sort.seqs"; } string getDescription() { return "puts sequences from a fasta, name, group, quality, flow or taxonomy file in the same order"; }