Revert to previous commit

[mothur.git] / slibshuff.h

diff --git a/slibshuff.h b/slibshuff.h
new file mode 100644 (file)
index 0000000..8e034f9
--- /dev/null
+++ b/slibshuff.h
@@ -0,0 +1,27 @@
+#ifndef SLIBSHUFF
+#define SLIBSHUFF
+
+/*
+ *  slibshuff.h
+ *  Mothur
+ *
+ *  Created by Pat Schloss on 4/8/09.
+ *  Copyright 2009 Patrick D. Schloss. All rights reserved.
+ *
+ */
+
+#include "fullmatrix.h"
+#include "libshuff.h"
+
+class SLibshuff : public Libshuff {
+
+public:
+       SLibshuff(FullMatrix*, int, float);
+       vector<vector<double> > evaluateAll();
+       float evaluatePair(int, int);
+       
+private:
+       double sCalculate(int, int);
+};
+
+#endif