created mothurOut class to handle logfiles

[mothur.git] / sharedsabundvector.cpp

diff --git a/sharedsabundvector.cpp b/sharedsabundvector.cpp
index a7dfd6683a09c3daa8cd67d2e5b16cd5880e979c..4aea5890a341ccde6b110c2db37098f99c90aeee 100644 (file)
--- a/sharedsabundvector.cpp
+++ b/sharedsabundvector.cpp
@@ -45,7 +45,7 @@ void SharedSAbundVector::set(int bin, int abundance, string groupName){
                if(bin > maxRank)       {       maxRank = bin;          }
        }
        catch(exception& e) {
-               errorOut(e, "SharedSAbundVector", "set");
+               m->errorOut(e, "SharedSAbundVector", "set");
                exit(1);
        }
 }
@@ -79,7 +79,7 @@ void SharedSAbundVector::push_back(int abundance, int bin, string groupName){
                numSeqs += (maxRank * abundance);
        }
        catch(exception& e) {
-               errorOut(e, "SharedSAbundVector", "push_back");
+               m->errorOut(e, "SharedSAbundVector", "push_back");
                exit(1);
        }
 }
@@ -107,7 +107,7 @@ void SharedSAbundVector::print(ostream& output){
                output << endl;
        }
        catch(exception& e) {
-               errorOut(e, "SharedSAbundVector", "print");
+               m->errorOut(e, "SharedSAbundVector", "print");
                exit(1);
        }
 }
@@ -154,7 +154,7 @@ RAbundVector SharedSAbundVector::getRAbundVector(){
                return rav;
        }
        catch(exception& e) {
-               errorOut(e, "SharedSAbundVector", "getRAbundVector");
+               m->errorOut(e, "SharedSAbundVector", "getRAbundVector");
                exit(1);
        }
 }
@@ -170,7 +170,7 @@ SAbundVector SharedSAbundVector::getSAbundVector(){
        
        }
        catch(exception& e) {
-               errorOut(e, "SharedSAbundVector", "getSAbundVector");
+               m->errorOut(e, "SharedSAbundVector", "getSAbundVector");
                exit(1);
        }
 }
@@ -204,7 +204,7 @@ SharedRAbundVector SharedSAbundVector::getSharedRAbundVector(){
                return rav;
        }
        catch(exception& e) {
-               errorOut(e, "SharedSAbundVector", "getSharedRAbundVector");
+               m->errorOut(e, "SharedSAbundVector", "getSharedRAbundVector");
                exit(1);
        }
 }
@@ -230,7 +230,7 @@ SharedOrderVector SharedSAbundVector::getSharedOrderVector() {
                return ov;
        }
        catch(exception& e) {
-               errorOut(e, "SharedSAbundVector", "getSharedOrderVector");
+               m->errorOut(e, "SharedSAbundVector", "getSharedOrderVector");
                exit(1);
        }
 }
@@ -257,7 +257,7 @@ OrderVector SharedSAbundVector::getOrderVector(map<string,int>* hold = NULL){
                return ov;
        }
        catch(exception& e) {
-               errorOut(e, "SharedSAbundVector", "getOrderVector");
+               m->errorOut(e, "SharedSAbundVector", "getOrderVector");
                exit(1);
        }
 }