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[mothur.git] / sharedjabund.h

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+#ifndef JABUND_H
+#define JABUND_H
+/*
+ *  sharedjabund.h
+ *  Dotur
+ *
+ *  Created by Sarah Westcott on 1/8/09.
+ *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
+ *
+ */
+
+/* This class implements the SharedJAbund estimator on two groups. 
+It is a child of the calculator class. */
+
+
+#include "calculator.h"
+
+/***********************************************************************/
+
+class JAbund : public Calculator  {
+       
+public:
+       JAbund() :  Calculator("jabund", 1, false) {};
+       EstOutput getValues(SAbundVector*) {return data;};
+       EstOutput getValues(vector<SharedRAbundVector*>);
+       string getCitation() { return "http://www.mothur.org/wiki/Jabund"; }
+private:
+       UVEst* uv;
+       
+};
+
+/***********************************************************************/
+
+#endif