added pipeline commands which involved change to command factory and command class...

[mothur.git] / setlogfilecommand.h

diff --git a/setlogfilecommand.h b/setlogfilecommand.h
index d16bcd65a3949f987eb6ed7521e83789608d2e79..d2b5c3d63bc3490d6a478fd3ced457706422f2ec 100644 (file)
--- a/setlogfilecommand.h
+++ b/setlogfilecommand.h
@@ -19,7 +19,12 @@ class SetLogFileCommand : public Command {
        
 public:
        SetLogFileCommand(string);
+       SetLogFileCommand() {}
        ~SetLogFileCommand();
+       vector<string> getRequiredParameters();
+       vector<string> getValidParameters();
+       vector<string> getRequiredFiles();
+       map<string, vector<string> > getOutputFiles() { return outputTypes; }
        int execute();
        void help();
        
@@ -27,6 +32,8 @@ private:
        CommandFactory* commandFactory;
        string name;
        bool abort, append;
+       vector<string> outputNames;
+       map<string, vector<string> > outputTypes;
                
 };