created mothurOut class to handle logfiles

[mothur.git] / sequence.hpp

diff --git a/sequence.hpp b/sequence.hpp
index f6d7c869853a17808d8d894466f3d473b18c13d8..f48bf13dc98d034cea520cf78b09124fff30cb33 100644 (file)
--- a/sequence.hpp
+++ b/sequence.hpp
@@ -15,7 +15,7 @@
  */
 
 #include "mothur.h"
-
+#include "mothurout.h"
 
 /**************************************************************************************************/
 
@@ -47,6 +47,7 @@ public:
        void printSequence(ostream&);
        
 private:
+       MothurOut* m;
        void initialize();
        string getSequenceString(ifstream&);
        string getCommentString(ifstream&);