fixed some bugs

[mothur.git] / screenseqscommand.cpp

diff --git a/screenseqscommand.cpp b/screenseqscommand.cpp
index 1c70a2b5a9723b64a4b9edd34cb2fc81e374e42d..ca1d616a867c33a3d42dd98131960db6d2224177 100644 (file)
--- a/screenseqscommand.cpp
+++ b/screenseqscommand.cpp
@@ -160,6 +160,9 @@ int ScreenSeqsCommand::execute(){
                if(groupfile != "")             {       screenGroupFile(badSeqNames);           }
                if(alignreport != "")   {       screenAlignReport(badSeqNames);         }
                
+               goodSeqOut.close();
+               badSeqOut.close();
+               inFASTA.close();
                return 0;
        }
        catch(exception& e) {