added set.dir command and modified commands to redirect input and output, removed...

[mothur.git] / removeseqscommand.h

diff --git a/removeseqscommand.h b/removeseqscommand.h
index 1ad1eee835e4ba0bf48e1be44b7c89631367f22e..1dcb0fceab5ed3800d2b604d2ba32ff632cfec8c 100644 (file)
--- a/removeseqscommand.h
+++ b/removeseqscommand.h
@@ -23,7 +23,7 @@ class RemoveSeqsCommand : public Command {
                
        private:
                set<string> names;
-               string accnosfile, fastafile, namefile, groupfile, alignfile, listfile;
+               string accnosfile, fastafile, namefile, groupfile, alignfile, listfile, outputDir;
                bool abort;
                
                void readFasta();