fixed bug in phylo.diversity rooting. added filename patterns and create filename...

[mothur.git] / removerarecommand.h

diff --git a/removerarecommand.h b/removerarecommand.h
index 7b4c6fb44f80b4d2ac1a96e9a11d3a417e2cc918..2cab7be6fa870d763de76a559b4dfbb72823cfb6 100644 (file)
--- a/removerarecommand.h
+++ b/removerarecommand.h
@@ -26,8 +26,9 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "remove.rare";                         }
        string getCommandCategory()             { return "OTU-Based Approaches";        }
-       string getOutputFileNameTag(string, string);
+       
        string getHelpString(); 
+    string getOutputPattern(string);   
        string getCitation() { return "http://www.mothur.org/wiki/Remove.rare"; }
        string getDescription()         { return "removes rare sequences from a sabund, rabund, shared or list and group file"; }