X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=removerarecommand.h;h=2cab7be6fa870d763de76a559b4dfbb72823cfb6;hp=7b4c6fb44f80b4d2ac1a96e9a11d3a417e2cc918;hb=1a5c2356c1b955c6ec024b2baf9f46377ee7c72e;hpb=79a7d3273749b08d4f9f8dfe350c964ff0c4351e diff --git a/removerarecommand.h b/removerarecommand.h index 7b4c6fb..2cab7be 100644 --- a/removerarecommand.h +++ b/removerarecommand.h @@ -26,8 +26,9 @@ public: vector setParameters(); string getCommandName() { return "remove.rare"; } string getCommandCategory() { return "OTU-Based Approaches"; } - string getOutputFileNameTag(string, string); + string getHelpString(); + string getOutputPattern(string); string getCitation() { return "http://www.mothur.org/wiki/Remove.rare"; } string getDescription() { return "removes rare sequences from a sabund, rabund, shared or list and group file"; }