added load.logfile command. changed summary.single output for subsample=t.

[mothur.git] / removeotuscommand.h

diff --git a/removeotuscommand.h b/removeotuscommand.h
index 6a7cf8a1e55fa1a5fe5915b4cb6da1c3150729ef..3a52a39f120a0d2af788478df3a590c64a7f9306 100644 (file)
--- a/removeotuscommand.h
+++ b/removeotuscommand.h
@@ -25,6 +25,7 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "remove.otus";                         }
        string getCommandCategory()             { return "OTU-Based Approaches";        }
+       string getOutputFileNameTag(string, string);
        string getHelpString(); 
        string getCitation() { return "http://www.mothur.org/wiki/Remove.otus"; }
        string getDescription()         { return "outputs a new list file containing the otus NOT containing sequences from the groups specified"; }
@@ -38,7 +39,6 @@ private:
        vector<string> outputNames, Groups;
        GroupMap* groupMap;
        
-       void readAccnos();
        int readListGroup();
        int processList(ListVector*&, GroupMap*&, ofstream&, ofstream&, bool&);