added set.dir command and modified commands to redirect input and output, removed...

[mothur.git] / readotucommand.h

diff --git a/readotucommand.h b/readotucommand.h
index 543642b66b4bd4b889fd54c8d19776fc71b17b8d..beb2f4bcbfe31ed89bdb2f9c393585a4ffae3667 100644 (file)
--- a/readotucommand.h
+++ b/readotucommand.h
@@ -29,7 +29,7 @@ private:
        InputData* input;
        Command* shared;
        GroupMap* groupMap;
-       string filename, listfile, orderfile, sharedfile, label, groupfile, sabundfile, rabundfile, format, groups;
+       string filename, listfile, orderfile, sharedfile, label, groupfile, sabundfile, rabundfile, format, groups, outputDir;
        vector<string> Groups;
 
        bool abort, allLines;