fixed some issues while testing 1.6

[mothur.git] / readdistcommand.cpp

diff --git a/readdistcommand.cpp b/readdistcommand.cpp
index 579f848bdb75b10b1350d1eb61b589de8f543ee0..263d57ba0e205d186b634d18a10bd4c72d4bbe8e 100644 (file)
--- a/readdistcommand.cpp
+++ b/readdistcommand.cpp
@@ -152,7 +152,7 @@ int ReadDistCommand::execute(){
                
                if (abort == true) {    return 0;       }
 
-               time_t start = time(NULL);
+               //time_t start = time(NULL);
                size_t numDists = 0;
                
                if (format == "matrix") {
@@ -192,15 +192,15 @@ int ReadDistCommand::execute(){
         }
                        }
 
-      string dist_string = "Dist:";
-      string count_string = "Count: ";
-                       for (int i = 0; i <= lines;i++) {       
-       dist_string = dist_string.append("\t").append(toString(dist_cutoff[i]));
-       count_string = count_string.append("\t").append(toString(dist_count[i]));
-                       }
-      mothurOut(dist_string); mothurOutEndLine(); mothurOut(count_string); mothurOutEndLine();
+     // string dist_string = "Dist:";
+    //  string count_string = "Count: ";
+                       //for (int i = 0; i <= lines;i++) {     
+       //dist_string = dist_string.append("\t").append(toString(dist_cutoff[i]));
+      //       count_string = count_string.append("\t").append(toString(dist_count[i]));
+               //      }
+      //mothurOut(dist_string); mothurOutEndLine(); mothurOut(count_string); mothurOutEndLine();
                }
-               mothurOut("It took " + toString(time(NULL) - start) + " secs to read " + toString(numDists) + " distances (cutoff: " + toString(cutoff) + ")"); mothurOutEndLine();
+               //mothurOut("It took " + toString(time(NULL) - start) + " secs to read " + toString(numDists) + " distances (cutoff: " + toString(cutoff) + ")"); mothurOutEndLine();
                return 0;
                
        }