random chagnes from pat

[mothur.git] / pairwiseseqscommand.cpp

diff --git a/pairwiseseqscommand.cpp b/pairwiseseqscommand.cpp
index 1e7a3388ce4780d369142385cc0b7bf15e96fae9..5c890404dea8ed4c5e9c6dae0cef4f41a1ef5f70 100644 (file)
--- a/pairwiseseqscommand.cpp
+++ b/pairwiseseqscommand.cpp
@@ -610,6 +610,7 @@ int PairwiseSeqsCommand::driver(int startLine, int endLine, string dFileName, fl
                                alignment->align(seqI.getUnaligned(), seqJ.getUnaligned());
                                seqI.setAligned(alignment->getSeqAAln());
                                seqJ.setAligned(alignment->getSeqBAln());
+
                                
                                distCalculator->calcDist(seqI, seqJ);
                                double dist = distCalculator->getDist();